Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.83■□□□□ 0.12
Trav16d-dv11A0A075B617 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav16d-dv11A0A075B617 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16d-dv11A0A075B617 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav16d-dv11A0A075B617 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Gm37136-201ENSMUST00000194368 194 ntBASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16d-dv11A0A075B617 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16d-dv11A0A075B617 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16d-dv11A0A075B617 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16d-dv11A0A075B617 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16d-dv11A0A075B617 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16d-dv11A0A075B617 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16d-dv11A0A075B617 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16d-dv11A0A075B617 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16d-dv11A0A075B617 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16d-dv11A0A075B617 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16d-dv11A0A075B617 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16d-dv11A0A075B617 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Trav16d-dv11A0A075B617 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16d-dv11A0A075B617 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.78■□□□□ 0.12
Trav16d-dv11A0A075B617 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16d-dv11A0A075B617 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16d-dv11A0A075B617 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16d-dv11A0A075B617 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16d-dv11A0A075B617 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16d-dv11A0A075B617 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16d-dv11A0A075B617 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16d-dv11A0A075B617 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16d-dv11A0A075B617 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.76■□□□□ 0.11
Trav16d-dv11A0A075B617 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16d-dv11A0A075B617 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16d-dv11A0A075B617 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Gm22567-201ENSMUST00000175542 342 ntBASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16d-dv11A0A075B617 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16d-dv11A0A075B617 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav16d-dv11A0A075B617 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 1179.9 ms