Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Mir1894-201ENSMUST00000122802 81 ntBASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm6266-201ENSMUST00000203844 806 ntBASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm18062-201ENSMUST00000208020 547 ntBASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm18055-201ENSMUST00000208254 547 ntBASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm17794-201ENSMUST00000220252 955 ntBASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
4933424G06RikA0A140LIP3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm6244-201ENSMUST00000178732 841 ntBASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm27839-201ENSMUST00000184242 106 ntBASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
4933424G06RikA0A140LIP3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
4933424G06RikA0A140LIP3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Gm2495-201ENSMUST00000191160 466 ntBASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
4933424G06RikA0A140LIP3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms