Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.28■■□□□ 1
Cdh17Q9R100 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.27■■□□□ 1
Cdh17Q9R100 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cdh17Q9R100 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Cdh17Q9R100 Gm44428-201ENSMUST00000204474 874 ntBASIC21.27■■□□□ 1
Cdh17Q9R100 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh17Q9R100 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh17Q9R100 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh17Q9R100 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh17Q9R100 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cdh17Q9R100 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh17Q9R100 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh17Q9R100 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh17Q9R100 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh17Q9R100 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh17Q9R100 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh17Q9R100 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.23■□□□□ 0.99
Cdh17Q9R100 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cdh17Q9R100 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh17Q9R100 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh17Q9R100 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cdh17Q9R100 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh17Q9R100 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cdh17Q9R100 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh17Q9R100 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdh17Q9R100 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh17Q9R100 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh17Q9R100 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.21■□□□□ 0.99
Cdh17Q9R100 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.21■□□□□ 0.99
Cdh17Q9R100 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdh17Q9R100 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh17Q9R100 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cdh17Q9R100 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.19■□□□□ 0.98
Cdh17Q9R100 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh17Q9R100 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh17Q9R100 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh17Q9R100 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Cdh17Q9R100 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh17Q9R100 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh17Q9R100 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh17Q9R100 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh17Q9R100 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.17■□□□□ 0.98
Cdh17Q9R100 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh17Q9R100 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh17Q9R100 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh17Q9R100 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh17Q9R100 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.16■□□□□ 0.98
Cdh17Q9R100 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cdh17Q9R100 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh17Q9R100 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh17Q9R100 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.16■□□□□ 0.98
Cdh17Q9R100 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh17Q9R100 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.16■□□□□ 0.98
Cdh17Q9R100 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh17Q9R100 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh17Q9R100 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh17Q9R100 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh17Q9R100 Scarna2-201ENSMUST00000157560 414 ntBASIC21.15■□□□□ 0.98
Cdh17Q9R100 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh17Q9R100 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cdh17Q9R100 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdh17Q9R100 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Cdh17Q9R100 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cdh17Q9R100 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.14■□□□□ 0.97
Cdh17Q9R100 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.14■□□□□ 0.97
Cdh17Q9R100 Gm9806-201ENSMUST00000051080 552 ntBASIC21.14■□□□□ 0.97
Cdh17Q9R100 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Cdh17Q9R100 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh17Q9R100 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh17Q9R100 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh17Q9R100 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh17Q9R100 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.13■□□□□ 0.97
Cdh17Q9R100 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cdh17Q9R100 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh17Q9R100 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms