Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SrfQ9JM73 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SrfQ9JM73 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SrfQ9JM73 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SrfQ9JM73 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SrfQ9JM73 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.87■□□□□ 0.93
SrfQ9JM73 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.87■□□□□ 0.93
SrfQ9JM73 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SrfQ9JM73 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SrfQ9JM73 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SrfQ9JM73 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SrfQ9JM73 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SrfQ9JM73 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SrfQ9JM73 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SrfQ9JM73 Gm10399-202ENSMUST00000202768 748 ntBASIC20.86■□□□□ 0.93
SrfQ9JM73 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SrfQ9JM73 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SrfQ9JM73 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
SrfQ9JM73 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SrfQ9JM73 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.85■□□□□ 0.93
SrfQ9JM73 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SrfQ9JM73 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SrfQ9JM73 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SrfQ9JM73 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SrfQ9JM73 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SrfQ9JM73 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SrfQ9JM73 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SrfQ9JM73 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SrfQ9JM73 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SrfQ9JM73 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SrfQ9JM73 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SrfQ9JM73 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SrfQ9JM73 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.83■□□□□ 0.93
SrfQ9JM73 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.83■□□□□ 0.93
SrfQ9JM73 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SrfQ9JM73 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SrfQ9JM73 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SrfQ9JM73 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.82■□□□□ 0.92
SrfQ9JM73 Gm12922-201ENSMUST00000120626 809 ntBASIC20.82■□□□□ 0.92
SrfQ9JM73 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SrfQ9JM73 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SrfQ9JM73 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.82■□□□□ 0.92
SrfQ9JM73 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SrfQ9JM73 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SrfQ9JM73 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SrfQ9JM73 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
SrfQ9JM73 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SrfQ9JM73 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SrfQ9JM73 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SrfQ9JM73 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SrfQ9JM73 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SrfQ9JM73 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SrfQ9JM73 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.8■□□□□ 0.92
SrfQ9JM73 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SrfQ9JM73 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SrfQ9JM73 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.8■□□□□ 0.92
SrfQ9JM73 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.8■□□□□ 0.92
SrfQ9JM73 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SrfQ9JM73 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SrfQ9JM73 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.79■□□□□ 0.92
SrfQ9JM73 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SrfQ9JM73 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SrfQ9JM73 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SrfQ9JM73 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SrfQ9JM73 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SrfQ9JM73 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SrfQ9JM73 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SrfQ9JM73 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.77■□□□□ 0.92
SrfQ9JM73 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SrfQ9JM73 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SrfQ9JM73 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.75■□□□□ 0.91
SrfQ9JM73 Gm21956-201ENSMUST00000179946 522 ntBASIC20.75■□□□□ 0.91
SrfQ9JM73 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SrfQ9JM73 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SrfQ9JM73 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.75■□□□□ 0.91
SrfQ9JM73 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SrfQ9JM73 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SrfQ9JM73 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SrfQ9JM73 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SrfQ9JM73 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.73■□□□□ 0.91
SrfQ9JM73 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SrfQ9JM73 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.72■□□□□ 0.91
SrfQ9JM73 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SrfQ9JM73 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.71■□□□□ 0.91
SrfQ9JM73 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.71■□□□□ 0.91
SrfQ9JM73 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.71■□□□□ 0.91
SrfQ9JM73 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SrfQ9JM73 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SrfQ9JM73 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SrfQ9JM73 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SrfQ9JM73 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SrfQ9JM73 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms