Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mbd3l1Q9D9H3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mbd3l1Q9D9H3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mbd3l1Q9D9H3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mbd3l1Q9D9H3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mbd3l1Q9D9H3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.91■□□□□ 0.62
Mbd3l1Q9D9H3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.9■□□□□ 0.62
Mbd3l1Q9D9H3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mbd3l1Q9D9H3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mbd3l1Q9D9H3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mbd3l1Q9D9H3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Mbd3l1Q9D9H3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mbd3l1Q9D9H3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mbd3l1Q9D9H3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mbd3l1Q9D9H3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Mbd3l1Q9D9H3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mbd3l1Q9D9H3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd3l1Q9D9H3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.87■□□□□ 0.61
Mbd3l1Q9D9H3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mbd3l1Q9D9H3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Mbd3l1Q9D9H3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mbd3l1Q9D9H3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd3l1Q9D9H3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd3l1Q9D9H3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd3l1Q9D9H3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd3l1Q9D9H3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd3l1Q9D9H3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd3l1Q9D9H3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd3l1Q9D9H3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd3l1Q9D9H3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Mbd3l1Q9D9H3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd3l1Q9D9H3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd3l1Q9D9H3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd3l1Q9D9H3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd3l1Q9D9H3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.84■□□□□ 0.61
Mbd3l1Q9D9H3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd3l1Q9D9H3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd3l1Q9D9H3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd3l1Q9D9H3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd3l1Q9D9H3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.83■□□□□ 0.61
Mbd3l1Q9D9H3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd3l1Q9D9H3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Mbd3l1Q9D9H3 Peli2-204ENSMUST00000226513 1320 ntBASIC18.83■□□□□ 0.61
Mbd3l1Q9D9H3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.83■□□□□ 0.6
Mbd3l1Q9D9H3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd3l1Q9D9H3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd3l1Q9D9H3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd3l1Q9D9H3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Mbd3l1Q9D9H3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd3l1Q9D9H3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Mbd3l1Q9D9H3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd3l1Q9D9H3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd3l1Q9D9H3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms