Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shmt2Q9CZN7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shmt2Q9CZN7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.71■□□□□ 0.91
Shmt2Q9CZN7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shmt2Q9CZN7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shmt2Q9CZN7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shmt2Q9CZN7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shmt2Q9CZN7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shmt2Q9CZN7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shmt2Q9CZN7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shmt2Q9CZN7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Shmt2Q9CZN7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.66■□□□□ 0.9
Shmt2Q9CZN7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.66■□□□□ 0.9
Shmt2Q9CZN7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Shmt2Q9CZN7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shmt2Q9CZN7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shmt2Q9CZN7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Shmt2Q9CZN7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shmt2Q9CZN7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.64■□□□□ 0.9
Shmt2Q9CZN7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shmt2Q9CZN7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.64■□□□□ 0.89
Shmt2Q9CZN7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.64■□□□□ 0.89
Shmt2Q9CZN7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.64■□□□□ 0.89
Shmt2Q9CZN7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shmt2Q9CZN7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shmt2Q9CZN7 Gm44428-201ENSMUST00000204474 874 ntBASIC20.63■□□□□ 0.89
Shmt2Q9CZN7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shmt2Q9CZN7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shmt2Q9CZN7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shmt2Q9CZN7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Shmt2Q9CZN7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Shmt2Q9CZN7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shmt2Q9CZN7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.6■□□□□ 0.89
Shmt2Q9CZN7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.6■□□□□ 0.89
Shmt2Q9CZN7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shmt2Q9CZN7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.59■□□□□ 0.89
Shmt2Q9CZN7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.59■□□□□ 0.89
Shmt2Q9CZN7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.59■□□□□ 0.89
Shmt2Q9CZN7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shmt2Q9CZN7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Shmt2Q9CZN7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shmt2Q9CZN7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shmt2Q9CZN7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.58■□□□□ 0.89
Shmt2Q9CZN7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Shmt2Q9CZN7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Shmt2Q9CZN7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shmt2Q9CZN7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Shmt2Q9CZN7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
Shmt2Q9CZN7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shmt2Q9CZN7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shmt2Q9CZN7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shmt2Q9CZN7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms