Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q9CR55 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q9CR55 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Q9CR55 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Q9CR55 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q9CR55 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q9CR55 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q9CR55 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.01■□□□□ 0.79
Q9CR55 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Q9CR55 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20■□□□□ 0.79
Q9CR55 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20■□□□□ 0.79
Q9CR55 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q9CR55 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q9CR55 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q9CR55 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.99■□□□□ 0.79
Q9CR55 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q9CR55 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.99■□□□□ 0.79
Q9CR55 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q9CR55 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q9CR55 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q9CR55 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q9CR55 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Q9CR55 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Q9CR55 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q9CR55 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Q9CR55 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Q9CR55 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Q9CR55 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q9CR55 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q9CR55 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Q9CR55 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Q9CR55 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9CR55 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Q9CR55 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q9CR55 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q9CR55 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q9CR55 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.95■□□□□ 0.78
Q9CR55 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q9CR55 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Q9CR55 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Q9CR55 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.94■□□□□ 0.78
Q9CR55 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q9CR55 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Q9CR55 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q9CR55 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q9CR55 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q9CR55 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q9CR55 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q9CR55 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.92■□□□□ 0.78
Q9CR55 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q9CR55 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Q9CR55 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q9CR55 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.92■□□□□ 0.78
Q9CR55 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q9CR55 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.91■□□□□ 0.78
Q9CR55 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CR55 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CR55 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Q9CR55 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.91■□□□□ 0.78
Q9CR55 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CR55 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CR55 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.91■□□□□ 0.78
Q9CR55 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CR55 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Q9CR55 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Q9CR55 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Q9CR55 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CR55 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CR55 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CR55 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CR55 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CR55 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CR55 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.9■□□□□ 0.78
Q9CR55 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Q9CR55 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Q9CR55 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Q9CR55 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CR55 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Q9CR55 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CR55 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CR55 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CR55 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CR55 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Q9CR55 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CR55 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.87■□□□□ 0.77
Q9CR55 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms