Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt88Q9CPR6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt88Q9CPR6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Krt88Q9CPR6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Krt88Q9CPR6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Krt88Q9CPR6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Krt88Q9CPR6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt88Q9CPR6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt88Q9CPR6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt88Q9CPR6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt88Q9CPR6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt88Q9CPR6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt88Q9CPR6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt88Q9CPR6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt88Q9CPR6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.52■□□□□ 0.72
Krt88Q9CPR6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Krt88Q9CPR6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Krt88Q9CPR6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Krt88Q9CPR6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt88Q9CPR6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt88Q9CPR6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Krt88Q9CPR6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt88Q9CPR6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt88Q9CPR6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Krt88Q9CPR6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Krt88Q9CPR6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.49■□□□□ 0.71
Krt88Q9CPR6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Krt88Q9CPR6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.48■□□□□ 0.71
Krt88Q9CPR6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Krt88Q9CPR6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Krt88Q9CPR6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt88Q9CPR6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
Krt88Q9CPR6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krt88Q9CPR6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt88Q9CPR6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krt88Q9CPR6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt88Q9CPR6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt88Q9CPR6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt88Q9CPR6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt88Q9CPR6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms