Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Raf1Q99N57 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raf1Q99N57 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raf1Q99N57 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raf1Q99N57 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raf1Q99N57 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raf1Q99N57 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Raf1Q99N57 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.35■□□□□ 0.69
Raf1Q99N57 Gm9806-201ENSMUST00000051080 552 ntBASIC19.35■□□□□ 0.69
Raf1Q99N57 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Raf1Q99N57 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.34■□□□□ 0.69
Raf1Q99N57 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raf1Q99N57 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Raf1Q99N57 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Raf1Q99N57 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raf1Q99N57 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Raf1Q99N57 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raf1Q99N57 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raf1Q99N57 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Raf1Q99N57 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raf1Q99N57 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raf1Q99N57 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.32■□□□□ 0.68
Raf1Q99N57 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.32■□□□□ 0.68
Raf1Q99N57 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Raf1Q99N57 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raf1Q99N57 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raf1Q99N57 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.32■□□□□ 0.68
Raf1Q99N57 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raf1Q99N57 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raf1Q99N57 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Raf1Q99N57 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Raf1Q99N57 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Raf1Q99N57 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Raf1Q99N57 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.3■□□□□ 0.68
Raf1Q99N57 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Raf1Q99N57 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Raf1Q99N57 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.3■□□□□ 0.68
Raf1Q99N57 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Raf1Q99N57 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Raf1Q99N57 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raf1Q99N57 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raf1Q99N57 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.29■□□□□ 0.68
Raf1Q99N57 Gm12366-201ENSMUST00000121722 873 ntBASIC19.29■□□□□ 0.68
Raf1Q99N57 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.29■□□□□ 0.68
Raf1Q99N57 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.29■□□□□ 0.68
Raf1Q99N57 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Raf1Q99N57 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raf1Q99N57 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.29■□□□□ 0.68
Raf1Q99N57 Gm5786-201ENSMUST00000085368 882 ntBASIC19.29■□□□□ 0.68
Raf1Q99N57 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raf1Q99N57 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Raf1Q99N57 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raf1Q99N57 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raf1Q99N57 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Raf1Q99N57 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Raf1Q99N57 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raf1Q99N57 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raf1Q99N57 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raf1Q99N57 Gm4799-201ENSMUST00000095396 657 ntBASIC19.28■□□□□ 0.68
Raf1Q99N57 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.28■□□□□ 0.68
Raf1Q99N57 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raf1Q99N57 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raf1Q99N57 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raf1Q99N57 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raf1Q99N57 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raf1Q99N57 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raf1Q99N57 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.26■□□□□ 0.67
Raf1Q99N57 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.26■□□□□ 0.67
Raf1Q99N57 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Raf1Q99N57 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Raf1Q99N57 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.26■□□□□ 0.67
Raf1Q99N57 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.26■□□□□ 0.67
Raf1Q99N57 Gm16437-201ENSMUST00000025669 507 ntBASIC19.26■□□□□ 0.67
Raf1Q99N57 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.26■□□□□ 0.67
Raf1Q99N57 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raf1Q99N57 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raf1Q99N57 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raf1Q99N57 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Raf1Q99N57 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raf1Q99N57 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Raf1Q99N57 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Raf1Q99N57 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raf1Q99N57 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raf1Q99N57 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raf1Q99N57 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Raf1Q99N57 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.23■□□□□ 0.67
Raf1Q99N57 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.23■□□□□ 0.67
Raf1Q99N57 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raf1Q99N57 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raf1Q99N57 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raf1Q99N57 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Raf1Q99N57 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raf1Q99N57 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms