Protein–RNA interactions for Protein: Q99N09

Ms4a6b, Membrane-spanning 4-domains subfamily A member 6B, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a6bQ99N09 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ms4a6bQ99N09 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ms4a6bQ99N09 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ms4a6bQ99N09 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ms4a6bQ99N09 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ms4a6bQ99N09 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ms4a6bQ99N09 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ms4a6bQ99N09 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ms4a6bQ99N09 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.55■□□□□ 0.4
Ms4a6bQ99N09 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ms4a6bQ99N09 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ms4a6bQ99N09 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ms4a6bQ99N09 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ms4a6bQ99N09 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ms4a6bQ99N09 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ms4a6bQ99N09 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ms4a6bQ99N09 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ms4a6bQ99N09 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ms4a6bQ99N09 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ms4a6bQ99N09 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ms4a6bQ99N09 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ms4a6bQ99N09 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ms4a6bQ99N09 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ms4a6bQ99N09 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.53■□□□□ 0.4
Ms4a6bQ99N09 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ms4a6bQ99N09 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ms4a6bQ99N09 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ms4a6bQ99N09 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.52■□□□□ 0.4
Ms4a6bQ99N09 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ms4a6bQ99N09 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ms4a6bQ99N09 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ms4a6bQ99N09 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ms4a6bQ99N09 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ms4a6bQ99N09 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ms4a6bQ99N09 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.5■□□□□ 0.39
Ms4a6bQ99N09 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.5■□□□□ 0.39
Ms4a6bQ99N09 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ms4a6bQ99N09 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.5■□□□□ 0.39
Ms4a6bQ99N09 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ms4a6bQ99N09 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ms4a6bQ99N09 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ms4a6bQ99N09 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ms4a6bQ99N09 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.47■□□□□ 0.39
Ms4a6bQ99N09 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ms4a6bQ99N09 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.47■□□□□ 0.39
Ms4a6bQ99N09 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ms4a6bQ99N09 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ms4a6bQ99N09 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ms4a6bQ99N09 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.46■□□□□ 0.39
Ms4a6bQ99N09 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Terc-201ENSMUST00000082862 423 ntBASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ms4a6bQ99N09 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ms4a6bQ99N09 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ms4a6bQ99N09 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ms4a6bQ99N09 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ms4a6bQ99N09 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ms4a6bQ99N09 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms