Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.63■■□□□ 1.05
Homer3Q99JP6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Homer3Q99JP6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Homer3Q99JP6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Homer3Q99JP6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Homer3Q99JP6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Homer3Q99JP6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Homer3Q99JP6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Homer3Q99JP6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Homer3Q99JP6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.61■■□□□ 1.05
Homer3Q99JP6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Homer3Q99JP6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Homer3Q99JP6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Homer3Q99JP6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Homer3Q99JP6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.61■■□□□ 1.05
Homer3Q99JP6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Homer3Q99JP6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Homer3Q99JP6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Homer3Q99JP6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Homer3Q99JP6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Homer3Q99JP6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Homer3Q99JP6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Homer3Q99JP6 Gm8503-201ENSMUST00000118131 455 ntBASIC21.6■■□□□ 1.05
Homer3Q99JP6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Homer3Q99JP6 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.6■■□□□ 1.05
Homer3Q99JP6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Homer3Q99JP6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.6■■□□□ 1.05
Homer3Q99JP6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Homer3Q99JP6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Homer3Q99JP6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Homer3Q99JP6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Homer3Q99JP6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Homer3Q99JP6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Homer3Q99JP6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Homer3Q99JP6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Homer3Q99JP6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Homer3Q99JP6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Homer3Q99JP6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Homer3Q99JP6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Homer3Q99JP6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.58■■□□□ 1.05
Homer3Q99JP6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.58■■□□□ 1.05
Homer3Q99JP6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Homer3Q99JP6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Homer3Q99JP6 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.57■■□□□ 1.04
Homer3Q99JP6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Homer3Q99JP6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Homer3Q99JP6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Homer3Q99JP6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Homer3Q99JP6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Homer3Q99JP6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Homer3Q99JP6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Homer3Q99JP6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Homer3Q99JP6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.55■■□□□ 1.04
Homer3Q99JP6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Homer3Q99JP6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Homer3Q99JP6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Homer3Q99JP6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Homer3Q99JP6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Homer3Q99JP6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Homer3Q99JP6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Homer3Q99JP6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Homer3Q99JP6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
Homer3Q99JP6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Homer3Q99JP6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Homer3Q99JP6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Homer3Q99JP6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Homer3Q99JP6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Homer3Q99JP6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Homer3Q99JP6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Gm45364-201ENSMUST00000210883 159 ntBASIC21.52■■□□□ 1.04
Homer3Q99JP6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Homer3Q99JP6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.52■■□□□ 1.03
Homer3Q99JP6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Homer3Q99JP6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Homer3Q99JP6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.5■■□□□ 1.03
Homer3Q99JP6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Homer3Q99JP6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Homer3Q99JP6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms