Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Thumpd1Q99J36 Gm9812-201ENSMUST00000061934 968 ntBASIC19.39■□□□□ 0.69
Thumpd1Q99J36 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd1Q99J36 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd1Q99J36 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.39■□□□□ 0.69
Thumpd1Q99J36 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Thumpd1Q99J36 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd1Q99J36 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd1Q99J36 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd1Q99J36 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
Thumpd1Q99J36 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd1Q99J36 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd1Q99J36 Gm4799-201ENSMUST00000095396 657 ntBASIC19.38■□□□□ 0.69
Thumpd1Q99J36 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd1Q99J36 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Thumpd1Q99J36 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.36■□□□□ 0.69
Thumpd1Q99J36 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.36■□□□□ 0.69
Thumpd1Q99J36 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thumpd1Q99J36 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Thumpd1Q99J36 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thumpd1Q99J36 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.35■□□□□ 0.69
Thumpd1Q99J36 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Thumpd1Q99J36 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd1Q99J36 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.34■□□□□ 0.69
Thumpd1Q99J36 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd1Q99J36 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd1Q99J36 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd1Q99J36 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thumpd1Q99J36 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Thumpd1Q99J36 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.33■□□□□ 0.69
Thumpd1Q99J36 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Thumpd1Q99J36 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Thumpd1Q99J36 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Thumpd1Q99J36 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Thumpd1Q99J36 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.33■□□□□ 0.68
Thumpd1Q99J36 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Thumpd1Q99J36 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd1Q99J36 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Thumpd1Q99J36 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thumpd1Q99J36 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Thumpd1Q99J36 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd1Q99J36 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Thumpd1Q99J36 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd1Q99J36 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.31■□□□□ 0.68
Thumpd1Q99J36 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thumpd1Q99J36 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd1Q99J36 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd1Q99J36 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd1Q99J36 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd1Q99J36 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd1Q99J36 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.3■□□□□ 0.68
Thumpd1Q99J36 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Gm6821-201ENSMUST00000107540 542 ntBASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd1Q99J36 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.28■□□□□ 0.68
Thumpd1Q99J36 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms