Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhgc3Q91XX1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc3Q91XX1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc3Q91XX1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc3Q91XX1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc3Q91XX1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc3Q91XX1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhgc3Q91XX1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc3Q91XX1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc3Q91XX1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhgc3Q91XX1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.48■□□□□ 0.87
Pcdhgc3Q91XX1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc3Q91XX1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhgc3Q91XX1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc3Q91XX1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.47■□□□□ 0.87
Pcdhgc3Q91XX1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Gm22567-201ENSMUST00000175542 342 ntBASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhgc3Q91XX1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc3Q91XX1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhgc3Q91XX1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc3Q91XX1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdhgc3Q91XX1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc3Q91XX1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc3Q91XX1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgc3Q91XX1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgc3Q91XX1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.44■□□□□ 0.86
Pcdhgc3Q91XX1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgc3Q91XX1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdhgc3Q91XX1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgc3Q91XX1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhgc3Q91XX1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgc3Q91XX1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgc3Q91XX1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgc3Q91XX1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgc3Q91XX1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgc3Q91XX1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdhgc3Q91XX1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgc3Q91XX1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgc3Q91XX1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhgc3Q91XX1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgc3Q91XX1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgc3Q91XX1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgc3Q91XX1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgc3Q91XX1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgc3Q91XX1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgc3Q91XX1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgc3Q91XX1 Gm8503-201ENSMUST00000118131 455 ntBASIC20.39■□□□□ 0.85
Pcdhgc3Q91XX1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgc3Q91XX1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgc3Q91XX1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgc3Q91XX1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhgc3Q91XX1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgc3Q91XX1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgc3Q91XX1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhgc3Q91XX1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgc3Q91XX1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgc3Q91XX1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgc3Q91XX1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgc3Q91XX1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhgc3Q91XX1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdhgc3Q91XX1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhgc3Q91XX1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdhgc3Q91XX1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgc3Q91XX1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgc3Q91XX1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgc3Q91XX1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgc3Q91XX1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.35■□□□□ 0.85
Pcdhgc3Q91XX1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgc3Q91XX1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgc3Q91XX1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhgc3Q91XX1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgc3Q91XX1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgc3Q91XX1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgc3Q91XX1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgc3Q91XX1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgc3Q91XX1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgc3Q91XX1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms