Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cspg4Q8VHY0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cspg4Q8VHY0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cspg4Q8VHY0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Cspg4Q8VHY0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cspg4Q8VHY0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cspg4Q8VHY0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.02■□□□□ 0.64
Cspg4Q8VHY0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Cspg4Q8VHY0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.01■□□□□ 0.63
Cspg4Q8VHY0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.01■□□□□ 0.63
Cspg4Q8VHY0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cspg4Q8VHY0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cspg4Q8VHY0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cspg4Q8VHY0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19■□□□□ 0.63
Cspg4Q8VHY0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cspg4Q8VHY0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cspg4Q8VHY0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19■□□□□ 0.63
Cspg4Q8VHY0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cspg4Q8VHY0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cspg4Q8VHY0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cspg4Q8VHY0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cspg4Q8VHY0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.99■□□□□ 0.63
Cspg4Q8VHY0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cspg4Q8VHY0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cspg4Q8VHY0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.98■□□□□ 0.63
Cspg4Q8VHY0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cspg4Q8VHY0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cspg4Q8VHY0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cspg4Q8VHY0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cspg4Q8VHY0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cspg4Q8VHY0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cspg4Q8VHY0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cspg4Q8VHY0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cspg4Q8VHY0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cspg4Q8VHY0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cspg4Q8VHY0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.94■□□□□ 0.62
Cspg4Q8VHY0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cspg4Q8VHY0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cspg4Q8VHY0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cspg4Q8VHY0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cspg4Q8VHY0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cspg4Q8VHY0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cspg4Q8VHY0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.92■□□□□ 0.62
Cspg4Q8VHY0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.92■□□□□ 0.62
Cspg4Q8VHY0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Gm27011-201ENSMUST00000182352 972 ntBASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cspg4Q8VHY0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cspg4Q8VHY0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cspg4Q8VHY0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cspg4Q8VHY0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Cspg4Q8VHY0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cspg4Q8VHY0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cspg4Q8VHY0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.89■□□□□ 0.61
Cspg4Q8VHY0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cspg4Q8VHY0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.89■□□□□ 0.61
Cspg4Q8VHY0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cspg4Q8VHY0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.89■□□□□ 0.61
Cspg4Q8VHY0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cspg4Q8VHY0 Golgb1-201ENSMUST00000023534 498 ntBASIC18.88■□□□□ 0.61
Cspg4Q8VHY0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms