Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rab40bQ8VHP8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab40bQ8VHP8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rab40bQ8VHP8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab40bQ8VHP8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab40bQ8VHP8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rab40bQ8VHP8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.57■□□□□ 0.72
Rab40bQ8VHP8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab40bQ8VHP8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab40bQ8VHP8 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.56■□□□□ 0.72
Rab40bQ8VHP8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.56■□□□□ 0.72
Rab40bQ8VHP8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab40bQ8VHP8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.56■□□□□ 0.72
Rab40bQ8VHP8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab40bQ8VHP8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
Rab40bQ8VHP8 Gm9812-201ENSMUST00000061934 968 ntBASIC19.55■□□□□ 0.72
Rab40bQ8VHP8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab40bQ8VHP8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rab40bQ8VHP8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab40bQ8VHP8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab40bQ8VHP8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.54■□□□□ 0.72
Rab40bQ8VHP8 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.54■□□□□ 0.72
Rab40bQ8VHP8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rab40bQ8VHP8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.53■□□□□ 0.72
Rab40bQ8VHP8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab40bQ8VHP8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab40bQ8VHP8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab40bQ8VHP8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Gm4799-201ENSMUST00000095396 657 ntBASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab40bQ8VHP8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.52■□□□□ 0.71
Rab40bQ8VHP8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.51■□□□□ 0.71
Rab40bQ8VHP8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab40bQ8VHP8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab40bQ8VHP8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rab40bQ8VHP8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.51■□□□□ 0.71
Rab40bQ8VHP8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rab40bQ8VHP8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab40bQ8VHP8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Rab40bQ8VHP8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rab40bQ8VHP8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rab40bQ8VHP8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Rab40bQ8VHP8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rab40bQ8VHP8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.49■□□□□ 0.71
Rab40bQ8VHP8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.49■□□□□ 0.71
Rab40bQ8VHP8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab40bQ8VHP8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab40bQ8VHP8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab40bQ8VHP8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.48■□□□□ 0.71
Rab40bQ8VHP8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rab40bQ8VHP8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rab40bQ8VHP8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.46■□□□□ 0.71
Rab40bQ8VHP8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab40bQ8VHP8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms