Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc58Q8R3Q6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc58Q8R3Q6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc58Q8R3Q6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms