Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Trim52Q8CDV4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.44■■□□□ 1.98
Trim52Q8CDV4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Trim52Q8CDV4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.44■■□□□ 1.98
Trim52Q8CDV4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Trim52Q8CDV4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trim52Q8CDV4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Trim52Q8CDV4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Trim52Q8CDV4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Trim52Q8CDV4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trim52Q8CDV4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC27.43■■□□□ 1.98
Trim52Q8CDV4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Trim52Q8CDV4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.42■■□□□ 1.98
Trim52Q8CDV4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC27.42■■□□□ 1.98
Trim52Q8CDV4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Trim52Q8CDV4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Trim52Q8CDV4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Trim52Q8CDV4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Trim52Q8CDV4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC27.41■■□□□ 1.98
Trim52Q8CDV4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Trim52Q8CDV4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Trim52Q8CDV4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim52Q8CDV4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC27.4■■□□□ 1.98
Trim52Q8CDV4 Gm5131-201ENSMUST00000212776 1238 ntBASIC27.4■■□□□ 1.98
Trim52Q8CDV4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim52Q8CDV4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim52Q8CDV4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim52Q8CDV4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trim52Q8CDV4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Trim52Q8CDV4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trim52Q8CDV4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim52Q8CDV4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim52Q8CDV4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Trim52Q8CDV4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim52Q8CDV4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim52Q8CDV4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim52Q8CDV4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Trim52Q8CDV4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC27.37■■□□□ 1.97
Trim52Q8CDV4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim52Q8CDV4 Gm28536-201ENSMUST00000190971 1317 ntBASIC27.37■■□□□ 1.97
Trim52Q8CDV4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim52Q8CDV4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim52Q8CDV4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC27.36■■□□□ 1.97
Trim52Q8CDV4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Trim52Q8CDV4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim52Q8CDV4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim52Q8CDV4 Etf1-202ENSMUST00000180351 108 ntBASIC27.35■■□□□ 1.97
Trim52Q8CDV4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim52Q8CDV4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC27.34■■□□□ 1.97
Trim52Q8CDV4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC27.34■■□□□ 1.97
Trim52Q8CDV4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC27.34■■□□□ 1.97
Trim52Q8CDV4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC27.34■■□□□ 1.97
Trim52Q8CDV4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Trim52Q8CDV4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trim52Q8CDV4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Trim52Q8CDV4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC27.33■■□□□ 1.97
Trim52Q8CDV4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Trim52Q8CDV4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim52Q8CDV4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC27.31■■□□□ 1.96
Trim52Q8CDV4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim52Q8CDV4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim52Q8CDV4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim52Q8CDV4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trim52Q8CDV4 Gm6934-201ENSMUST00000194780 1905 ntBASIC27.3■■□□□ 1.96
Trim52Q8CDV4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC27.3■■□□□ 1.96
Trim52Q8CDV4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Trim52Q8CDV4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trim52Q8CDV4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC27.3■■□□□ 1.96
Trim52Q8CDV4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trim52Q8CDV4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC27.29■■□□□ 1.96
Trim52Q8CDV4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trim52Q8CDV4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC27.28■■□□□ 1.96
Trim52Q8CDV4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Trim52Q8CDV4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC27.28■■□□□ 1.96
Trim52Q8CDV4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trim52Q8CDV4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC27.27■■□□□ 1.96
Trim52Q8CDV4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trim52Q8CDV4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Trim52Q8CDV4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim52Q8CDV4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim52Q8CDV4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim52Q8CDV4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Trim52Q8CDV4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trim52Q8CDV4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trim52Q8CDV4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Trim52Q8CDV4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC27.25■■□□□ 1.95
Trim52Q8CDV4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC27.24■■□□□ 1.95
Trim52Q8CDV4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Trim52Q8CDV4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC27.24■■□□□ 1.95
Trim52Q8CDV4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim52Q8CDV4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC27.24■■□□□ 1.95
Trim52Q8CDV4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim52Q8CDV4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim52Q8CDV4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim52Q8CDV4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Trim52Q8CDV4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.23■■□□□ 1.95
Trim52Q8CDV4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC27.22■■□□□ 1.95
Trim52Q8CDV4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.21■■□□□ 1.95
Trim52Q8CDV4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim52Q8CDV4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC27.21■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms