Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Gm9812-201ENSMUST00000061934 968 ntBASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lysmd4Q8CC84 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd4Q8CC84 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.53■□□□□ 0.72
Lysmd4Q8CC84 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Lysmd4Q8CC84 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd4Q8CC84 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lysmd4Q8CC84 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Lysmd4Q8CC84 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd4Q8CC84 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd4Q8CC84 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd4Q8CC84 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd4Q8CC84 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.5■□□□□ 0.71
Lysmd4Q8CC84 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd4Q8CC84 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.49■□□□□ 0.71
Lysmd4Q8CC84 Gm8503-201ENSMUST00000118131 455 ntBASIC19.48■□□□□ 0.71
Lysmd4Q8CC84 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd4Q8CC84 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lysmd4Q8CC84 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd4Q8CC84 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd4Q8CC84 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd4Q8CC84 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd4Q8CC84 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd4Q8CC84 Gm4799-201ENSMUST00000095396 657 ntBASIC19.46■□□□□ 0.71
Lysmd4Q8CC84 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lysmd4Q8CC84 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd4Q8CC84 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.45■□□□□ 0.7
Lysmd4Q8CC84 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd4Q8CC84 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.44■□□□□ 0.7
Lysmd4Q8CC84 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd4Q8CC84 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd4Q8CC84 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.44■□□□□ 0.7
Lysmd4Q8CC84 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
Lysmd4Q8CC84 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd4Q8CC84 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd4Q8CC84 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd4Q8CC84 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms