Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm9949Q8C9F4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm9949Q8C9F4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm9949Q8C9F4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm9949Q8C9F4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Mir6538-201ENSMUST00000183713 110 ntBASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm9949Q8C9F4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm9949Q8C9F4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.17■□□□□ 0.34
Gm9949Q8C9F4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm9949Q8C9F4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm9949Q8C9F4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm9949Q8C9F4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Gm7332-201ENSMUST00000118351 454 ntBASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm9949Q8C9F4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm9949Q8C9F4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm9949Q8C9F4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm9949Q8C9F4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm9949Q8C9F4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm9949Q8C9F4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Gm12366-201ENSMUST00000121722 873 ntBASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Gm5786-201ENSMUST00000085368 882 ntBASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm9949Q8C9F4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm9949Q8C9F4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm9949Q8C9F4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm9949Q8C9F4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm9949Q8C9F4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm9949Q8C9F4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm9949Q8C9F4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm9949Q8C9F4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Gm22567-201ENSMUST00000175542 342 ntBASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm9949Q8C9F4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm9949Q8C9F4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm9949Q8C9F4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm9949Q8C9F4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm9949Q8C9F4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm9949Q8C9F4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm9949Q8C9F4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm9949Q8C9F4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm9949Q8C9F4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms