Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.42■■□□□ 1.34
Fam78aQ8C552 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Fam78aQ8C552 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Fam78aQ8C552 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.41■■□□□ 1.34
Fam78aQ8C552 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Fam78aQ8C552 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Fam78aQ8C552 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Fam78aQ8C552 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.4■■□□□ 1.34
Fam78aQ8C552 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
Fam78aQ8C552 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Fam78aQ8C552 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.4■■□□□ 1.34
Fam78aQ8C552 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.39■■□□□ 1.34
Fam78aQ8C552 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Fam78aQ8C552 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.39■■□□□ 1.34
Fam78aQ8C552 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
Fam78aQ8C552 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Fam78aQ8C552 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.39■■□□□ 1.33
Fam78aQ8C552 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Fam78aQ8C552 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.39■■□□□ 1.33
Fam78aQ8C552 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.39■■□□□ 1.33
Fam78aQ8C552 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Fam78aQ8C552 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Fam78aQ8C552 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Fam78aQ8C552 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Fam78aQ8C552 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Fam78aQ8C552 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Fam78aQ8C552 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.38■■□□□ 1.33
Fam78aQ8C552 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Fam78aQ8C552 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Fam78aQ8C552 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Fam78aQ8C552 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Fam78aQ8C552 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.37■■□□□ 1.33
Fam78aQ8C552 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
Fam78aQ8C552 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Fam78aQ8C552 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Fam78aQ8C552 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.36■■□□□ 1.33
Fam78aQ8C552 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.36■■□□□ 1.33
Fam78aQ8C552 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.36■■□□□ 1.33
Fam78aQ8C552 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Fam78aQ8C552 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
Fam78aQ8C552 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Fam78aQ8C552 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Fam78aQ8C552 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Fam78aQ8C552 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.34■■□□□ 1.33
Fam78aQ8C552 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Fam78aQ8C552 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.33■■□□□ 1.33
Fam78aQ8C552 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.33■■□□□ 1.33
Fam78aQ8C552 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.33■■□□□ 1.33
Fam78aQ8C552 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fam78aQ8C552 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Fam78aQ8C552 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fam78aQ8C552 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fam78aQ8C552 Gm7417-201ENSMUST00000192950 473 ntBASIC23.32■■□□□ 1.32
Fam78aQ8C552 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.32■■□□□ 1.32
Fam78aQ8C552 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fam78aQ8C552 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Fam78aQ8C552 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.31■■□□□ 1.32
Fam78aQ8C552 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.31■■□□□ 1.32
Fam78aQ8C552 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Fam78aQ8C552 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.3■■□□□ 1.32
Fam78aQ8C552 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.3■■□□□ 1.32
Fam78aQ8C552 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Fam78aQ8C552 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Fam78aQ8C552 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Fam78aQ8C552 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Fam78aQ8C552 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Fam78aQ8C552 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Fam78aQ8C552 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Fam78aQ8C552 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Fam78aQ8C552 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Fam78aQ8C552 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Fam78aQ8C552 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Fam78aQ8C552 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam78aQ8C552 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.27■■□□□ 1.32
Fam78aQ8C552 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam78aQ8C552 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.26■■□□□ 1.31
Fam78aQ8C552 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.26■■□□□ 1.31
Fam78aQ8C552 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Fam78aQ8C552 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam78aQ8C552 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Fam78aQ8C552 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam78aQ8C552 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam78aQ8C552 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam78aQ8C552 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Fam78aQ8C552 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.25■■□□□ 1.31
Fam78aQ8C552 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Fam78aQ8C552 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam78aQ8C552 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Fam78aQ8C552 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Fam78aQ8C552 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.24■■□□□ 1.31
Fam78aQ8C552 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.24■■□□□ 1.31
Fam78aQ8C552 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Fam78aQ8C552 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Fam78aQ8C552 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam78aQ8C552 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam78aQ8C552 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam78aQ8C552 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.23■■□□□ 1.31
Fam78aQ8C552 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam78aQ8C552 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam78aQ8C552 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms