Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Brat1Q8C3R1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.02■■□□□ 1.28
Brat1Q8C3R1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.02■■□□□ 1.28
Brat1Q8C3R1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.02■■□□□ 1.28
Brat1Q8C3R1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Brat1Q8C3R1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Brat1Q8C3R1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.01■■□□□ 1.27
Brat1Q8C3R1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Brat1Q8C3R1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Brat1Q8C3R1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Brat1Q8C3R1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Brat1Q8C3R1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Brat1Q8C3R1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23■■□□□ 1.27
Brat1Q8C3R1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Brat1Q8C3R1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Brat1Q8C3R1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Brat1Q8C3R1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Brat1Q8C3R1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Gm45444-201ENSMUST00000211394 898 ntBASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Brat1Q8C3R1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Brat1Q8C3R1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Brat1Q8C3R1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Brat1Q8C3R1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Brat1Q8C3R1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.97■■□□□ 1.27
Brat1Q8C3R1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Brat1Q8C3R1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Brat1Q8C3R1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Brat1Q8C3R1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
Brat1Q8C3R1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Brat1Q8C3R1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Brat1Q8C3R1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Brat1Q8C3R1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Brat1Q8C3R1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Brat1Q8C3R1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Gm13238-201ENSMUST00000117655 780 ntBASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Brat1Q8C3R1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Brat1Q8C3R1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Brat1Q8C3R1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Brat1Q8C3R1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Brat1Q8C3R1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Brat1Q8C3R1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Brat1Q8C3R1 Gm43566-201ENSMUST00000196851 808 ntBASIC22.92■■□□□ 1.26
Brat1Q8C3R1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Brat1Q8C3R1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Brat1Q8C3R1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Brat1Q8C3R1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Brat1Q8C3R1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Brat1Q8C3R1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Brat1Q8C3R1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Brat1Q8C3R1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
Brat1Q8C3R1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
Brat1Q8C3R1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.89■■□□□ 1.25
Brat1Q8C3R1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Brat1Q8C3R1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Brat1Q8C3R1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Brat1Q8C3R1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Brat1Q8C3R1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Brat1Q8C3R1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Brat1Q8C3R1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Brat1Q8C3R1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Brat1Q8C3R1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.88■■□□□ 1.25
Brat1Q8C3R1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.88■■□□□ 1.25
Brat1Q8C3R1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Brat1Q8C3R1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Brat1Q8C3R1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Brat1Q8C3R1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Brat1Q8C3R1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Brat1Q8C3R1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Brat1Q8C3R1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Brat1Q8C3R1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms