Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Sh3rf2Q8BZT2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3rf2Q8BZT2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3rf2Q8BZT2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sh3rf2Q8BZT2 Gm45102-201ENSMUST00000207427 857 ntBASIC22.21■■□□□ 1.15
Sh3rf2Q8BZT2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3rf2Q8BZT2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3rf2Q8BZT2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.2■■□□□ 1.14
Sh3rf2Q8BZT2 Gm14117-201ENSMUST00000122417 843 ntBASIC22.2■■□□□ 1.14
Sh3rf2Q8BZT2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3rf2Q8BZT2 Gm9959-201ENSMUST00000068277 390 ntBASIC22.2■■□□□ 1.14
Sh3rf2Q8BZT2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.2■■□□□ 1.14
Sh3rf2Q8BZT2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.2■■□□□ 1.14
Sh3rf2Q8BZT2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Sh3rf2Q8BZT2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3rf2Q8BZT2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.19■■□□□ 1.14
Sh3rf2Q8BZT2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.19■■□□□ 1.14
Sh3rf2Q8BZT2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3rf2Q8BZT2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3rf2Q8BZT2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.18■■□□□ 1.14
Sh3rf2Q8BZT2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Sh3rf2Q8BZT2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3rf2Q8BZT2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3rf2Q8BZT2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf2Q8BZT2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf2Q8BZT2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf2Q8BZT2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf2Q8BZT2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf2Q8BZT2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf2Q8BZT2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf2Q8BZT2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf2Q8BZT2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf2Q8BZT2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf2Q8BZT2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf2Q8BZT2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf2Q8BZT2 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.14■■□□□ 1.13
Sh3rf2Q8BZT2 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.14■■□□□ 1.13
Sh3rf2Q8BZT2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sh3rf2Q8BZT2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sh3rf2Q8BZT2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Sh3rf2Q8BZT2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.13■■□□□ 1.13
Sh3rf2Q8BZT2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3rf2Q8BZT2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3rf2Q8BZT2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Sh3rf2Q8BZT2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3rf2Q8BZT2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3rf2Q8BZT2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf2Q8BZT2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf2Q8BZT2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.12■■□□□ 1.13
Sh3rf2Q8BZT2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Sh3rf2Q8BZT2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf2Q8BZT2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3rf2Q8BZT2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3rf2Q8BZT2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3rf2Q8BZT2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf2Q8BZT2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.1■■□□□ 1.13
Sh3rf2Q8BZT2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Sh3rf2Q8BZT2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf2Q8BZT2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3rf2Q8BZT2 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.09■■□□□ 1.13
Sh3rf2Q8BZT2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3rf2Q8BZT2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Sh3rf2Q8BZT2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf2Q8BZT2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf2Q8BZT2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.08■■□□□ 1.13
Sh3rf2Q8BZT2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Etf1-202ENSMUST00000180351 108 ntBASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.07■■□□□ 1.12
Sh3rf2Q8BZT2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf2Q8BZT2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf2Q8BZT2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3rf2Q8BZT2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.04■■□□□ 1.12
Sh3rf2Q8BZT2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.04■■□□□ 1.12
Sh3rf2Q8BZT2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms