Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Gm7332-201ENSMUST00000118351 454 ntBASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cpsf4Q8BQZ5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21■□□□□ 0.95
Cpsf4Q8BQZ5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpsf4Q8BQZ5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21■□□□□ 0.95
Cpsf4Q8BQZ5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf4Q8BQZ5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf4Q8BQZ5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf4Q8BQZ5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf4Q8BQZ5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Cpsf4Q8BQZ5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cpsf4Q8BQZ5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Cpsf4Q8BQZ5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Cpsf4Q8BQZ5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf4Q8BQZ5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf4Q8BQZ5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cpsf4Q8BQZ5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf4Q8BQZ5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf4Q8BQZ5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf4Q8BQZ5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf4Q8BQZ5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf4Q8BQZ5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf4Q8BQZ5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf4Q8BQZ5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cpsf4Q8BQZ5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Gm44428-201ENSMUST00000204474 874 ntBASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.96■□□□□ 0.95
Cpsf4Q8BQZ5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf4Q8BQZ5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cpsf4Q8BQZ5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf4Q8BQZ5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf4Q8BQZ5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf4Q8BQZ5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf4Q8BQZ5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf4Q8BQZ5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.93■□□□□ 0.94
Cpsf4Q8BQZ5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf4Q8BQZ5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf4Q8BQZ5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf4Q8BQZ5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf4Q8BQZ5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf4Q8BQZ5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf4Q8BQZ5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf4Q8BQZ5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf4Q8BQZ5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf4Q8BQZ5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4Q8BQZ5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
Cpsf4Q8BQZ5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf4Q8BQZ5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf4Q8BQZ5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.89■□□□□ 0.93
Cpsf4Q8BQZ5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf4Q8BQZ5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf4Q8BQZ5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cpsf4Q8BQZ5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf4Q8BQZ5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cpsf4Q8BQZ5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.88■□□□□ 0.93
Cpsf4Q8BQZ5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf4Q8BQZ5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf4Q8BQZ5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf4Q8BQZ5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf4Q8BQZ5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf4Q8BQZ5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms