Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
VmacQ8BP01 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
VmacQ8BP01 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.25■■□□□ 1.63
VmacQ8BP01 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
VmacQ8BP01 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
VmacQ8BP01 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
VmacQ8BP01 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
VmacQ8BP01 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
VmacQ8BP01 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
VmacQ8BP01 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VmacQ8BP01 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
VmacQ8BP01 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VmacQ8BP01 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VmacQ8BP01 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
VmacQ8BP01 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VmacQ8BP01 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
VmacQ8BP01 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
VmacQ8BP01 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
VmacQ8BP01 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VmacQ8BP01 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VmacQ8BP01 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VmacQ8BP01 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.21■■□□□ 1.63
VmacQ8BP01 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VmacQ8BP01 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
VmacQ8BP01 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
VmacQ8BP01 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
VmacQ8BP01 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
VmacQ8BP01 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
VmacQ8BP01 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
VmacQ8BP01 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
VmacQ8BP01 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VmacQ8BP01 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VmacQ8BP01 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.19■■□□□ 1.62
VmacQ8BP01 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.19■■□□□ 1.62
VmacQ8BP01 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.19■■□□□ 1.62
VmacQ8BP01 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
VmacQ8BP01 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
VmacQ8BP01 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.19■■□□□ 1.62
VmacQ8BP01 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
VmacQ8BP01 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.17■■□□□ 1.62
VmacQ8BP01 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
VmacQ8BP01 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
VmacQ8BP01 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VmacQ8BP01 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VmacQ8BP01 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
VmacQ8BP01 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VmacQ8BP01 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.15■■□□□ 1.62
VmacQ8BP01 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VmacQ8BP01 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
VmacQ8BP01 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VmacQ8BP01 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VmacQ8BP01 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VmacQ8BP01 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VmacQ8BP01 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
VmacQ8BP01 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.13■■□□□ 1.61
VmacQ8BP01 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.13■■□□□ 1.61
VmacQ8BP01 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VmacQ8BP01 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
VmacQ8BP01 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
VmacQ8BP01 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.12■■□□□ 1.61
VmacQ8BP01 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
VmacQ8BP01 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.12■■□□□ 1.61
VmacQ8BP01 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
VmacQ8BP01 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
VmacQ8BP01 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.11■■□□□ 1.61
VmacQ8BP01 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
VmacQ8BP01 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VmacQ8BP01 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.1■■□□□ 1.61
VmacQ8BP01 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.1■■□□□ 1.61
VmacQ8BP01 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VmacQ8BP01 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.1■■□□□ 1.61
VmacQ8BP01 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
VmacQ8BP01 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
VmacQ8BP01 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
VmacQ8BP01 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.09■■□□□ 1.61
VmacQ8BP01 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VmacQ8BP01 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
VmacQ8BP01 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.09■■□□□ 1.61
VmacQ8BP01 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms