Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh20Q8BIZ0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh20Q8BIZ0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Pcdh20Q8BIZ0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdh20Q8BIZ0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Gm12366-201ENSMUST00000121722 873 ntBASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Gm5786-201ENSMUST00000085368 882 ntBASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh20Q8BIZ0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh20Q8BIZ0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh20Q8BIZ0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh20Q8BIZ0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdh20Q8BIZ0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh20Q8BIZ0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh20Q8BIZ0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh20Q8BIZ0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Gm27502-201ENSMUST00000183495 199 ntBASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh20Q8BIZ0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh20Q8BIZ0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh20Q8BIZ0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh20Q8BIZ0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh20Q8BIZ0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdh20Q8BIZ0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdh20Q8BIZ0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdh20Q8BIZ0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh20Q8BIZ0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh20Q8BIZ0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh20Q8BIZ0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdh20Q8BIZ0 Gm14523-201ENSMUST00000117260 558 ntBASIC21■□□□□ 0.95
Pcdh20Q8BIZ0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21■□□□□ 0.95
Pcdh20Q8BIZ0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21■□□□□ 0.95
Pcdh20Q8BIZ0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh20Q8BIZ0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh20Q8BIZ0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh20Q8BIZ0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Gm7332-201ENSMUST00000118351 454 ntBASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms