Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.2■■□□□ 1.62
Trnp1Q80ZI1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Trnp1Q80ZI1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Trnp1Q80ZI1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trnp1Q80ZI1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trnp1Q80ZI1 AC140930.3-201ENSMUST00000222935 274 ntBASIC25.18■■□□□ 1.62
Trnp1Q80ZI1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Trnp1Q80ZI1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trnp1Q80ZI1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.17■■□□□ 1.62
Trnp1Q80ZI1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Trnp1Q80ZI1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Trnp1Q80ZI1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trnp1Q80ZI1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trnp1Q80ZI1 Gm12821-201ENSMUST00000120022 600 ntBASIC25.16■■□□□ 1.62
Trnp1Q80ZI1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC25.16■■□□□ 1.62
Trnp1Q80ZI1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trnp1Q80ZI1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trnp1Q80ZI1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trnp1Q80ZI1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trnp1Q80ZI1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trnp1Q80ZI1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trnp1Q80ZI1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trnp1Q80ZI1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trnp1Q80ZI1 Gm10399-202ENSMUST00000202768 748 ntBASIC25.13■■□□□ 1.61
Trnp1Q80ZI1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Trnp1Q80ZI1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trnp1Q80ZI1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Trnp1Q80ZI1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trnp1Q80ZI1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trnp1Q80ZI1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trnp1Q80ZI1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trnp1Q80ZI1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trnp1Q80ZI1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Trnp1Q80ZI1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC25.1■■□□□ 1.61
Trnp1Q80ZI1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Trnp1Q80ZI1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trnp1Q80ZI1 Gm27454-201ENSMUST00000185090 204 ntBASIC25.09■■□□□ 1.61
Trnp1Q80ZI1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trnp1Q80ZI1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trnp1Q80ZI1 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.08■■□□□ 1.61
Trnp1Q80ZI1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trnp1Q80ZI1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.08■■□□□ 1.61
Trnp1Q80ZI1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
Trnp1Q80ZI1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trnp1Q80ZI1 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.07■■□□□ 1.6
Trnp1Q80ZI1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trnp1Q80ZI1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Trnp1Q80ZI1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trnp1Q80ZI1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trnp1Q80ZI1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trnp1Q80ZI1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Trnp1Q80ZI1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Trnp1Q80ZI1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trnp1Q80ZI1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.04■■□□□ 1.6
Trnp1Q80ZI1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.04■■□□□ 1.6
Trnp1Q80ZI1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trnp1Q80ZI1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trnp1Q80ZI1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trnp1Q80ZI1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trnp1Q80ZI1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.03■■□□□ 1.6
Trnp1Q80ZI1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trnp1Q80ZI1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trnp1Q80ZI1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trnp1Q80ZI1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trnp1Q80ZI1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trnp1Q80ZI1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.02■■□□□ 1.6
Trnp1Q80ZI1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Trnp1Q80ZI1 Gm45417-201ENSMUST00000209533 758 ntBASIC25.02■■□□□ 1.6
Trnp1Q80ZI1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Trnp1Q80ZI1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Trnp1Q80ZI1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25■■□□□ 1.59
Trnp1Q80ZI1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25■■□□□ 1.59
Trnp1Q80ZI1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trnp1Q80ZI1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Trnp1Q80ZI1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms