Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.28■■□□□ 1.48
Usp6nlQ80XC3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp6nlQ80XC3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Usp6nlQ80XC3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Usp6nlQ80XC3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Usp6nlQ80XC3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Usp6nlQ80XC3 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.26■■□□□ 1.47
Usp6nlQ80XC3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Usp6nlQ80XC3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Usp6nlQ80XC3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.24■■□□□ 1.47
Usp6nlQ80XC3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.24■■□□□ 1.47
Usp6nlQ80XC3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.24■■□□□ 1.47
Usp6nlQ80XC3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Usp6nlQ80XC3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.24■■□□□ 1.47
Usp6nlQ80XC3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.23■■□□□ 1.47
Usp6nlQ80XC3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Usp6nlQ80XC3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
Usp6nlQ80XC3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
Usp6nlQ80XC3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Usp6nlQ80XC3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.22■■□□□ 1.47
Usp6nlQ80XC3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Usp6nlQ80XC3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Usp6nlQ80XC3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Usp6nlQ80XC3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Usp6nlQ80XC3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Usp6nlQ80XC3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Usp6nlQ80XC3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Usp6nlQ80XC3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.2■■□□□ 1.46
Usp6nlQ80XC3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Usp6nlQ80XC3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Usp6nlQ80XC3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Usp6nlQ80XC3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp6nlQ80XC3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp6nlQ80XC3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp6nlQ80XC3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp6nlQ80XC3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp6nlQ80XC3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Usp6nlQ80XC3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp6nlQ80XC3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Usp6nlQ80XC3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp6nlQ80XC3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp6nlQ80XC3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp6nlQ80XC3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp6nlQ80XC3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.17■■□□□ 1.46
Usp6nlQ80XC3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp6nlQ80XC3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.17■■□□□ 1.46
Usp6nlQ80XC3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Usp6nlQ80XC3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.16■■□□□ 1.46
Usp6nlQ80XC3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.16■■□□□ 1.46
Usp6nlQ80XC3 Gm40881-201ENSMUST00000223397 166 ntBASIC24.16■■□□□ 1.46
Usp6nlQ80XC3 Gm13241-201ENSMUST00000094493 780 ntBASIC24.16■■□□□ 1.46
Usp6nlQ80XC3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Usp6nlQ80XC3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.15■■□□□ 1.46
Usp6nlQ80XC3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Usp6nlQ80XC3 Gm22238-201ENSMUST00000175222 88 ntBASIC24.15■■□□□ 1.46
Usp6nlQ80XC3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Usp6nlQ80XC3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Usp6nlQ80XC3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Usp6nlQ80XC3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Usp6nlQ80XC3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Usp6nlQ80XC3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Usp6nlQ80XC3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Usp6nlQ80XC3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Usp6nlQ80XC3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.13■■□□□ 1.45
Usp6nlQ80XC3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Usp6nlQ80XC3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Usp6nlQ80XC3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Usp6nlQ80XC3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.12■■□□□ 1.45
Usp6nlQ80XC3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.12■■□□□ 1.45
Usp6nlQ80XC3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.12■■□□□ 1.45
Usp6nlQ80XC3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Usp6nlQ80XC3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp6nlQ80XC3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp6nlQ80XC3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp6nlQ80XC3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Usp6nlQ80XC3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp6nlQ80XC3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Usp6nlQ80XC3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms