Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc116Q80X53 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc116Q80X53 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc116Q80X53 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc116Q80X53 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ccdc116Q80X53 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc116Q80X53 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ccdc116Q80X53 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc116Q80X53 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc116Q80X53 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc116Q80X53 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc116Q80X53 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc116Q80X53 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc116Q80X53 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc116Q80X53 Gm11175-201ENSMUST00000116172 543 ntBASIC21.33■■□□□ 1.01
Ccdc116Q80X53 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.33■■□□□ 1.01
Ccdc116Q80X53 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc116Q80X53 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc116Q80X53 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ccdc116Q80X53 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc116Q80X53 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc116Q80X53 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc116Q80X53 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ccdc116Q80X53 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc116Q80X53 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.31■■□□□ 1
Ccdc116Q80X53 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc116Q80X53 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc116Q80X53 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.31■■□□□ 1
Ccdc116Q80X53 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.31■■□□□ 1
Ccdc116Q80X53 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc116Q80X53 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccdc116Q80X53 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc116Q80X53 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Ccdc116Q80X53 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc116Q80X53 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc116Q80X53 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc116Q80X53 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc116Q80X53 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccdc116Q80X53 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccdc116Q80X53 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc116Q80X53 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc116Q80X53 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.28■■□□□ 1
Ccdc116Q80X53 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc116Q80X53 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc116Q80X53 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc116Q80X53 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc116Q80X53 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc116Q80X53 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc116Q80X53 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc116Q80X53 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc116Q80X53 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc116Q80X53 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc116Q80X53 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc116Q80X53 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc116Q80X53 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc116Q80X53 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc116Q80X53 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc116Q80X53 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc116Q80X53 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ccdc116Q80X53 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc116Q80X53 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc116Q80X53 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc116Q80X53 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc116Q80X53 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc116Q80X53 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc116Q80X53 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc116Q80X53 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc116Q80X53 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.24■□□□□ 0.99
Ccdc116Q80X53 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc116Q80X53 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.24■□□□□ 0.99
Ccdc116Q80X53 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc116Q80X53 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc116Q80X53 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc116Q80X53 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc116Q80X53 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc116Q80X53 Gm27502-201ENSMUST00000183495 199 ntBASIC21.23■□□□□ 0.99
Ccdc116Q80X53 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc116Q80X53 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms