Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC34.65■■■■□ 3.14
Rpap1Q80TE0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Rpap1Q80TE0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Rpap1Q80TE0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Rpap1Q80TE0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Rpap1Q80TE0 Gm40881-201ENSMUST00000223397 166 ntBASIC34.64■■■■□ 3.14
Rpap1Q80TE0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Rpap1Q80TE0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
Rpap1Q80TE0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
Rpap1Q80TE0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Rpap1Q80TE0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Rpap1Q80TE0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Rpap1Q80TE0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Rpap1Q80TE0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Rpap1Q80TE0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Rpap1Q80TE0 Gm28536-201ENSMUST00000190971 1317 ntBASIC34.61■■■■□ 3.13
Rpap1Q80TE0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Rpap1Q80TE0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC34.61■■■■□ 3.13
Rpap1Q80TE0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Rpap1Q80TE0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Rpap1Q80TE0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
Rpap1Q80TE0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC34.59■■■■□ 3.13
Rpap1Q80TE0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC34.59■■■■□ 3.13
Rpap1Q80TE0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Rpap1Q80TE0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC34.58■■■■□ 3.13
Rpap1Q80TE0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Rpap1Q80TE0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC34.57■■■■□ 3.13
Rpap1Q80TE0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Rpap1Q80TE0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Rpap1Q80TE0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC34.56■■■■□ 3.12
Rpap1Q80TE0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC34.56■■■■□ 3.12
Rpap1Q80TE0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Rpap1Q80TE0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC34.56■■■■□ 3.12
Rpap1Q80TE0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC34.55■■■■□ 3.12
Rpap1Q80TE0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Rpap1Q80TE0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
Rpap1Q80TE0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC34.55■■■■□ 3.12
Rpap1Q80TE0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC34.55■■■■□ 3.12
Rpap1Q80TE0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Rpap1Q80TE0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
Rpap1Q80TE0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Rpap1Q80TE0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Rpap1Q80TE0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
Rpap1Q80TE0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Rpap1Q80TE0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Rpap1Q80TE0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC34.53■■■■□ 3.12
Rpap1Q80TE0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
Rpap1Q80TE0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Rpap1Q80TE0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Rpap1Q80TE0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC34.52■■■■□ 3.12
Rpap1Q80TE0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
Rpap1Q80TE0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Rpap1Q80TE0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC34.5■■■■□ 3.11
Rpap1Q80TE0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC34.5■■■■□ 3.11
Rpap1Q80TE0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Rpap1Q80TE0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Rpap1Q80TE0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Rpap1Q80TE0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC34.49■■■■□ 3.11
Rpap1Q80TE0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC34.48■■■■□ 3.11
Rpap1Q80TE0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Rpap1Q80TE0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC34.47■■■■□ 3.11
Rpap1Q80TE0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC34.47■■■■□ 3.11
Rpap1Q80TE0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Rpap1Q80TE0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC34.47■■■■□ 3.11
Rpap1Q80TE0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Rpap1Q80TE0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Rpap1Q80TE0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Rpap1Q80TE0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Rpap1Q80TE0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Rpap1Q80TE0 Gm12922-201ENSMUST00000120626 809 ntBASIC34.46■■■■□ 3.11
Rpap1Q80TE0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC34.46■■■■□ 3.11
Rpap1Q80TE0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Rpap1Q80TE0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Rpap1Q80TE0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
Rpap1Q80TE0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC34.43■■■■□ 3.1
Rpap1Q80TE0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Rpap1Q80TE0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Rpap1Q80TE0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC34.42■■■■□ 3.1
Rpap1Q80TE0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC34.42■■■■□ 3.1
Rpap1Q80TE0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
Rpap1Q80TE0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Rpap1Q80TE0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Rpap1Q80TE0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC34.41■■■■□ 3.1
Rpap1Q80TE0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Rpap1Q80TE0 AC140930.3-201ENSMUST00000222935 274 ntBASIC34.4■■■■□ 3.1
Rpap1Q80TE0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Rpap1Q80TE0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rpap1Q80TE0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rpap1Q80TE0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rpap1Q80TE0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rpap1Q80TE0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rpap1Q80TE0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rpap1Q80TE0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rpap1Q80TE0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rpap1Q80TE0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Rpap1Q80TE0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
Rpap1Q80TE0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Rpap1Q80TE0 Gm42699-201ENSMUST00000198104 1657 ntBASIC34.35■■■■□ 3.09
Rpap1Q80TE0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Rpap1Q80TE0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC34.35■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms