Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scn10aQ6QIY3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Scn10aQ6QIY3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scn10aQ6QIY3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.57■■□□□ 1.68
Scn10aQ6QIY3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Scn10aQ6QIY3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.56■■□□□ 1.68
Scn10aQ6QIY3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Scn10aQ6QIY3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.56■■□□□ 1.68
Scn10aQ6QIY3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Scn10aQ6QIY3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Scn10aQ6QIY3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Scn10aQ6QIY3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scn10aQ6QIY3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.55■■□□□ 1.68
Scn10aQ6QIY3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scn10aQ6QIY3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Scn10aQ6QIY3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Scn10aQ6QIY3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Scn10aQ6QIY3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Scn10aQ6QIY3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.54■■□□□ 1.68
Scn10aQ6QIY3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Scn10aQ6QIY3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Scn10aQ6QIY3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Scn10aQ6QIY3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Scn10aQ6QIY3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Scn10aQ6QIY3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.53■■□□□ 1.68
Scn10aQ6QIY3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Scn10aQ6QIY3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Scn10aQ6QIY3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.52■■□□□ 1.68
Scn10aQ6QIY3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Scn10aQ6QIY3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Scn10aQ6QIY3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
Scn10aQ6QIY3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Scn10aQ6QIY3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.49■■□□□ 1.67
Scn10aQ6QIY3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.49■■□□□ 1.67
Scn10aQ6QIY3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Scn10aQ6QIY3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.49■■□□□ 1.67
Scn10aQ6QIY3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.49■■□□□ 1.67
Scn10aQ6QIY3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.48■■□□□ 1.67
Scn10aQ6QIY3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.48■■□□□ 1.67
Scn10aQ6QIY3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Scn10aQ6QIY3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Scn10aQ6QIY3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Scn10aQ6QIY3 Serp2-204ENSMUST00000228055 705 ntBASIC25.47■■□□□ 1.67
Scn10aQ6QIY3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Scn10aQ6QIY3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Scn10aQ6QIY3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC25.47■■□□□ 1.67
Scn10aQ6QIY3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Scn10aQ6QIY3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Scn10aQ6QIY3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Scn10aQ6QIY3 Gm10399-202ENSMUST00000202768 748 ntBASIC25.45■■□□□ 1.67
Scn10aQ6QIY3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Scn10aQ6QIY3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Scn10aQ6QIY3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Scn10aQ6QIY3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Scn10aQ6QIY3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Scn10aQ6QIY3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Scn10aQ6QIY3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.45■■□□□ 1.66
Scn10aQ6QIY3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scn10aQ6QIY3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scn10aQ6QIY3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scn10aQ6QIY3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scn10aQ6QIY3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.43■■□□□ 1.66
Scn10aQ6QIY3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Scn10aQ6QIY3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Scn10aQ6QIY3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Scn10aQ6QIY3 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.42■■□□□ 1.66
Scn10aQ6QIY3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.42■■□□□ 1.66
Scn10aQ6QIY3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Scn10aQ6QIY3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.42■■□□□ 1.66
Scn10aQ6QIY3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Scn10aQ6QIY3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Scn10aQ6QIY3 Gm27454-201ENSMUST00000185090 204 ntBASIC25.41■■□□□ 1.66
Scn10aQ6QIY3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Scn10aQ6QIY3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Scn10aQ6QIY3 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.4■■□□□ 1.66
Scn10aQ6QIY3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.4■■□□□ 1.66
Scn10aQ6QIY3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Scn10aQ6QIY3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Scn10aQ6QIY3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.39■■□□□ 1.66
Scn10aQ6QIY3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Scn10aQ6QIY3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Scn10aQ6QIY3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.38■■□□□ 1.65
Scn10aQ6QIY3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Scn10aQ6QIY3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.38■■□□□ 1.65
Scn10aQ6QIY3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Scn10aQ6QIY3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 AC140930.3-201ENSMUST00000222935 274 ntBASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Scn10aQ6QIY3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.35■■□□□ 1.65
Scn10aQ6QIY3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
Scn10aQ6QIY3 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.35■■□□□ 1.65
Scn10aQ6QIY3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Scn10aQ6QIY3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Scn10aQ6QIY3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Scn10aQ6QIY3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms