Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.18■■□□□ 1.3
Shroom1Q5SX79 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Shroom1Q5SX79 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom1Q5SX79 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom1Q5SX79 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Shroom1Q5SX79 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom1Q5SX79 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom1Q5SX79 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom1Q5SX79 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.17■■□□□ 1.3
Shroom1Q5SX79 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom1Q5SX79 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom1Q5SX79 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Shroom1Q5SX79 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom1Q5SX79 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.16■■□□□ 1.3
Shroom1Q5SX79 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Shroom1Q5SX79 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom1Q5SX79 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom1Q5SX79 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom1Q5SX79 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Shroom1Q5SX79 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Shroom1Q5SX79 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Shroom1Q5SX79 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Shroom1Q5SX79 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Shroom1Q5SX79 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Shroom1Q5SX79 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Shroom1Q5SX79 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom1Q5SX79 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Shroom1Q5SX79 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom1Q5SX79 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom1Q5SX79 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.12■■□□□ 1.29
Shroom1Q5SX79 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom1Q5SX79 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.12■■□□□ 1.29
Shroom1Q5SX79 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom1Q5SX79 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom1Q5SX79 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom1Q5SX79 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Shroom1Q5SX79 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom1Q5SX79 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom1Q5SX79 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom1Q5SX79 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom1Q5SX79 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom1Q5SX79 Gm14117-201ENSMUST00000122417 843 ntBASIC23.09■■□□□ 1.29
Shroom1Q5SX79 Gm10232-201ENSMUST00000089221 720 ntBASIC23.09■■□□□ 1.29
Shroom1Q5SX79 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom1Q5SX79 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom1Q5SX79 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Gm9959-201ENSMUST00000068277 390 ntBASIC23.08■■□□□ 1.29
Shroom1Q5SX79 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom1Q5SX79 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Shroom1Q5SX79 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom1Q5SX79 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom1Q5SX79 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shroom1Q5SX79 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shroom1Q5SX79 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.06■■□□□ 1.28
Shroom1Q5SX79 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shroom1Q5SX79 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shroom1Q5SX79 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom1Q5SX79 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shroom1Q5SX79 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Shroom1Q5SX79 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Shroom1Q5SX79 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Shroom1Q5SX79 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom1Q5SX79 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Shroom1Q5SX79 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Shroom1Q5SX79 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom1Q5SX79 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom1Q5SX79 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom1Q5SX79 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom1Q5SX79 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.02■■□□□ 1.28
Shroom1Q5SX79 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Shroom1Q5SX79 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shroom1Q5SX79 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Shroom1Q5SX79 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shroom1Q5SX79 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shroom1Q5SX79 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shroom1Q5SX79 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms