Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim63Q38HM4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim63Q38HM4 Rab21-202ENSMUST00000218831 843 ntBASIC18.07■□□□□ 0.48
Trim63Q38HM4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim63Q38HM4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim63Q38HM4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim63Q38HM4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim63Q38HM4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim63Q38HM4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim63Q38HM4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim63Q38HM4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim63Q38HM4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim63Q38HM4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim63Q38HM4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim63Q38HM4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim63Q38HM4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim63Q38HM4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Trim63Q38HM4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim63Q38HM4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim63Q38HM4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.05■□□□□ 0.48
Trim63Q38HM4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim63Q38HM4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim63Q38HM4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim63Q38HM4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim63Q38HM4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Trim63Q38HM4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim63Q38HM4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim63Q38HM4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim63Q38HM4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim63Q38HM4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim63Q38HM4 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.03■□□□□ 0.48
Trim63Q38HM4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim63Q38HM4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim63Q38HM4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim63Q38HM4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Trim63Q38HM4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trim63Q38HM4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim63Q38HM4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim63Q38HM4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim63Q38HM4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim63Q38HM4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim63Q38HM4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim63Q38HM4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trim63Q38HM4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18■□□□□ 0.47
Trim63Q38HM4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim63Q38HM4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim63Q38HM4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim63Q38HM4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim63Q38HM4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim63Q38HM4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim63Q38HM4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim63Q38HM4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim63Q38HM4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim63Q38HM4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim63Q38HM4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim63Q38HM4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim63Q38HM4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim63Q38HM4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim63Q38HM4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim63Q38HM4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim63Q38HM4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim63Q38HM4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim63Q38HM4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim63Q38HM4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim63Q38HM4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim63Q38HM4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim63Q38HM4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim63Q38HM4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim63Q38HM4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim63Q38HM4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim63Q38HM4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim63Q38HM4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim63Q38HM4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim63Q38HM4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim63Q38HM4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim63Q38HM4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim63Q38HM4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms