Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Thumpd3P97770 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Thumpd3P97770 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.96■■□□□ 1.11
Thumpd3P97770 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Thumpd3P97770 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.96■■□□□ 1.11
Thumpd3P97770 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Thumpd3P97770 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.11
Thumpd3P97770 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Thumpd3P97770 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.95■■□□□ 1.1
Thumpd3P97770 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Thumpd3P97770 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Thumpd3P97770 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Thumpd3P97770 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Thumpd3P97770 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Thumpd3P97770 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.94■■□□□ 1.1
Thumpd3P97770 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Thumpd3P97770 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Thumpd3P97770 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Thumpd3P97770 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Thumpd3P97770 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Thumpd3P97770 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Thumpd3P97770 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Thumpd3P97770 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Thumpd3P97770 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Thumpd3P97770 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Thumpd3P97770 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Thumpd3P97770 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Thumpd3P97770 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Thumpd3P97770 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.92■■□□□ 1.1
Thumpd3P97770 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Thumpd3P97770 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.92■■□□□ 1.1
Thumpd3P97770 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Thumpd3P97770 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Thumpd3P97770 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.92■■□□□ 1.1
Thumpd3P97770 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Thumpd3P97770 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Thumpd3P97770 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.91■■□□□ 1.1
Thumpd3P97770 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Thumpd3P97770 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.91■■□□□ 1.1
Thumpd3P97770 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Thumpd3P97770 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Thumpd3P97770 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Thumpd3P97770 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.9■■□□□ 1.1
Thumpd3P97770 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.9■■□□□ 1.1
Thumpd3P97770 Gm12366-201ENSMUST00000121722 873 ntBASIC21.9■■□□□ 1.1
Thumpd3P97770 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.9■■□□□ 1.1
Thumpd3P97770 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.9■■□□□ 1.1
Thumpd3P97770 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Thumpd3P97770 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.9■■□□□ 1.1
Thumpd3P97770 Gm5786-201ENSMUST00000085368 882 ntBASIC21.9■■□□□ 1.1
Thumpd3P97770 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Thumpd3P97770 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Thumpd3P97770 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Thumpd3P97770 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Thumpd3P97770 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Thumpd3P97770 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Thumpd3P97770 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Thumpd3P97770 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Thumpd3P97770 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Thumpd3P97770 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Thumpd3P97770 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Thumpd3P97770 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Thumpd3P97770 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Thumpd3P97770 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Thumpd3P97770 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Thumpd3P97770 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Thumpd3P97770 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.87■■□□□ 1.09
Thumpd3P97770 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Thumpd3P97770 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Thumpd3P97770 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Thumpd3P97770 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Thumpd3P97770 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Thumpd3P97770 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Thumpd3P97770 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
Thumpd3P97770 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Thumpd3P97770 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.86■■□□□ 1.09
Thumpd3P97770 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Thumpd3P97770 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Thumpd3P97770 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Thumpd3P97770 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Thumpd3P97770 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Thumpd3P97770 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Thumpd3P97770 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Thumpd3P97770 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Thumpd3P97770 Gm27502-201ENSMUST00000183495 199 ntBASIC21.84■■□□□ 1.09
Thumpd3P97770 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Thumpd3P97770 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Thumpd3P97770 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Thumpd3P97770 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.83■■□□□ 1.09
Thumpd3P97770 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Thumpd3P97770 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Thumpd3P97770 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Thumpd3P97770 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms