Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm3P62311 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.85■□□□□ 0.77
Lsm3P62311 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm3P62311 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm3P62311 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm3P62311 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm3P62311 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.85■□□□□ 0.77
Lsm3P62311 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.85■□□□□ 0.77
Lsm3P62311 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm3P62311 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm3P62311 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lsm3P62311 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm3P62311 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm3P62311 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Lsm3P62311 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm3P62311 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm3P62311 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Lsm3P62311 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm3P62311 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.83■□□□□ 0.77
Lsm3P62311 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm3P62311 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm3P62311 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm3P62311 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm3P62311 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Lsm3P62311 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm3P62311 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Lsm3P62311 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm3P62311 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm3P62311 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm3P62311 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Lsm3P62311 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Lsm3P62311 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm3P62311 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm3P62311 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm3P62311 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm3P62311 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm3P62311 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.81■□□□□ 0.76
Lsm3P62311 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm3P62311 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm3P62311 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Lsm3P62311 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm3P62311 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm3P62311 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm3P62311 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm3P62311 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm3P62311 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lsm3P62311 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.8■□□□□ 0.76
Lsm3P62311 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm3P62311 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm3P62311 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Lsm3P62311 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm3P62311 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm3P62311 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm3P62311 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm3P62311 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm3P62311 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Lsm3P62311 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm3P62311 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm3P62311 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm3P62311 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.78■□□□□ 0.76
Lsm3P62311 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm3P62311 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm3P62311 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm3P62311 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.75
Lsm3P62311 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lsm3P62311 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lsm3P62311 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm3P62311 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm3P62311 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm3P62311 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm3P62311 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm3P62311 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.75■□□□□ 0.75
Lsm3P62311 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm3P62311 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm3P62311 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.75■□□□□ 0.75
Lsm3P62311 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm3P62311 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm3P62311 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.74■□□□□ 0.75
Lsm3P62311 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lsm3P62311 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lsm3P62311 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.74■□□□□ 0.75
Lsm3P62311 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.73■□□□□ 0.75
Lsm3P62311 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm3P62311 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm3P62311 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm3P62311 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.73■□□□□ 0.75
Lsm3P62311 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm3P62311 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lsm3P62311 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Lsm3P62311 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm3P62311 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm3P62311 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Lsm3P62311 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Lsm3P62311 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.72■□□□□ 0.75
Lsm3P62311 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm3P62311 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm3P62311 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm3P62311 Iqck-206ENSMUST00000208658 2891 ntBASIC19.71■□□□□ 0.75
Lsm3P62311 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm3P62311 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms