Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sem1P60897 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sem1P60897 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sem1P60897 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.71■□□□□ 0.91
Sem1P60897 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sem1P60897 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sem1P60897 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Sem1P60897 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sem1P60897 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sem1P60897 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sem1P60897 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sem1P60897 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sem1P60897 Golph3-202ENSMUST00000226517 2359 ntBASIC20.69■□□□□ 0.9
Sem1P60897 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Sem1P60897 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sem1P60897 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sem1P60897 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.69■□□□□ 0.9
Sem1P60897 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sem1P60897 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.68■□□□□ 0.9
Sem1P60897 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sem1P60897 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sem1P60897 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sem1P60897 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sem1P60897 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sem1P60897 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sem1P60897 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Sem1P60897 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sem1P60897 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sem1P60897 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sem1P60897 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sem1P60897 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sem1P60897 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.66■□□□□ 0.9
Sem1P60897 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sem1P60897 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sem1P60897 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sem1P60897 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sem1P60897 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sem1P60897 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sem1P60897 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sem1P60897 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sem1P60897 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sem1P60897 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.65■□□□□ 0.9
Sem1P60897 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Sem1P60897 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sem1P60897 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.64■□□□□ 0.89
Sem1P60897 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sem1P60897 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sem1P60897 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Sem1P60897 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sem1P60897 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sem1P60897 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sem1P60897 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.63■□□□□ 0.89
Sem1P60897 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Sem1P60897 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sem1P60897 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sem1P60897 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sem1P60897 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sem1P60897 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sem1P60897 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sem1P60897 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.61■□□□□ 0.89
Sem1P60897 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Sem1P60897 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sem1P60897 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Sem1P60897 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sem1P60897 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sem1P60897 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sem1P60897 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sem1P60897 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sem1P60897 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sem1P60897 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sem1P60897 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.6■□□□□ 0.89
Sem1P60897 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sem1P60897 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sem1P60897 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sem1P60897 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sem1P60897 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sem1P60897 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.58■□□□□ 0.89
Sem1P60897 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sem1P60897 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sem1P60897 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sem1P60897 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Sem1P60897 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sem1P60897 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sem1P60897 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sem1P60897 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sem1P60897 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sem1P60897 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sem1P60897 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sem1P60897 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sem1P60897 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sem1P60897 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.55■□□□□ 0.88
Sem1P60897 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms