Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn18P56857 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn18P56857 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn18P56857 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn18P56857 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cldn18P56857 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cldn18P56857 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cldn18P56857 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn18P56857 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn18P56857 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.55■□□□□ 0.72
Cldn18P56857 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.55■□□□□ 0.72
Cldn18P56857 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn18P56857 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cldn18P56857 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn18P56857 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cldn18P56857 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn18P56857 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn18P56857 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn18P56857 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn18P56857 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn18P56857 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn18P56857 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn18P56857 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.52■□□□□ 0.72
Cldn18P56857 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn18P56857 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Cldn18P56857 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn18P56857 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn18P56857 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cldn18P56857 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.52■□□□□ 0.71
Cldn18P56857 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cldn18P56857 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn18P56857 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn18P56857 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn18P56857 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn18P56857 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn18P56857 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.5■□□□□ 0.71
Cldn18P56857 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn18P56857 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn18P56857 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn18P56857 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn18P56857 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn18P56857 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn18P56857 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cldn18P56857 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cldn18P56857 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn18P56857 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn18P56857 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn18P56857 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cldn18P56857 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.48■□□□□ 0.71
Cldn18P56857 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn18P56857 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cldn18P56857 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn18P56857 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn18P56857 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn18P56857 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn18P56857 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn18P56857 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cldn18P56857 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn18P56857 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn18P56857 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn18P56857 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn18P56857 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn18P56857 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn18P56857 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cldn18P56857 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn18P56857 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn18P56857 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn18P56857 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn18P56857 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn18P56857 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn18P56857 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn18P56857 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn18P56857 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn18P56857 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn18P56857 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn18P56857 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn18P56857 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.43■□□□□ 0.7
Cldn18P56857 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn18P56857 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cldn18P56857 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.42■□□□□ 0.7
Cldn18P56857 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 181.8 ms