Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lhx4P53776 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Lhx4P53776 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx4P53776 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx4P53776 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lhx4P53776 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.3■□□□□ 0.52
Lhx4P53776 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx4P53776 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx4P53776 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx4P53776 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx4P53776 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.29■□□□□ 0.52
Lhx4P53776 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx4P53776 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx4P53776 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx4P53776 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx4P53776 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lhx4P53776 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Lhx4P53776 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx4P53776 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx4P53776 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx4P53776 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx4P53776 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Lhx4P53776 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.28■□□□□ 0.52
Lhx4P53776 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Lhx4P53776 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx4P53776 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx4P53776 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx4P53776 Gm44428-201ENSMUST00000204474 874 ntBASIC18.27■□□□□ 0.52
Lhx4P53776 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Lhx4P53776 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.26■□□□□ 0.51
Lhx4P53776 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.26■□□□□ 0.51
Lhx4P53776 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.26■□□□□ 0.51
Lhx4P53776 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx4P53776 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx4P53776 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx4P53776 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Lhx4P53776 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lhx4P53776 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx4P53776 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx4P53776 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx4P53776 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.25■□□□□ 0.51
Lhx4P53776 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx4P53776 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lhx4P53776 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Lhx4P53776 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.24■□□□□ 0.51
Lhx4P53776 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Lhx4P53776 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Lhx4P53776 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Lhx4P53776 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx4P53776 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx4P53776 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx4P53776 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx4P53776 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx4P53776 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Lhx4P53776 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx4P53776 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx4P53776 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx4P53776 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx4P53776 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx4P53776 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx4P53776 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx4P53776 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx4P53776 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lhx4P53776 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lhx4P53776 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx4P53776 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lhx4P53776 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Lhx4P53776 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Lhx4P53776 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
Lhx4P53776 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx4P53776 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.2■□□□□ 0.5
Lhx4P53776 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx4P53776 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx4P53776 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx4P53776 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx4P53776 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Lhx4P53776 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.2■□□□□ 0.5
Lhx4P53776 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx4P53776 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lhx4P53776 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.19■□□□□ 0.5
Lhx4P53776 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx4P53776 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx4P53776 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lhx4P53776 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.18■□□□□ 0.5
Lhx4P53776 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx4P53776 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lhx4P53776 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.17■□□□□ 0.5
Lhx4P53776 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx4P53776 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx4P53776 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.17■□□□□ 0.5
Lhx4P53776 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx4P53776 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.17■□□□□ 0.5
Lhx4P53776 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms