Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xcl1P47993 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xcl1P47993 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.3□□□□□ -0.12
Xcl1P47993 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xcl1P47993 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.3□□□□□ -0.12
Xcl1P47993 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xcl1P47993 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xcl1P47993 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xcl1P47993 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Xcl1P47993 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xcl1P47993 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Xcl1P47993 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Xcl1P47993 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xcl1P47993 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xcl1P47993 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xcl1P47993 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xcl1P47993 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Xcl1P47993 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xcl1P47993 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xcl1P47993 Rab21-202ENSMUST00000218831 843 ntBASIC14.28□□□□□ -0.12
Xcl1P47993 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xcl1P47993 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Xcl1P47993 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.27□□□□□ -0.12
Xcl1P47993 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Xcl1P47993 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.27□□□□□ -0.12
Xcl1P47993 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Xcl1P47993 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Xcl1P47993 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xcl1P47993 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Xcl1P47993 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xcl1P47993 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.27□□□□□ -0.13
Xcl1P47993 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xcl1P47993 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.26□□□□□ -0.13
Xcl1P47993 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xcl1P47993 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Xcl1P47993 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xcl1P47993 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xcl1P47993 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Xcl1P47993 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Xcl1P47993 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC14.26□□□□□ -0.13
Xcl1P47993 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xcl1P47993 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xcl1P47993 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Xcl1P47993 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Xcl1P47993 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xcl1P47993 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Xcl1P47993 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xcl1P47993 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xcl1P47993 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xcl1P47993 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Xcl1P47993 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Xcl1P47993 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Xcl1P47993 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xcl1P47993 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xcl1P47993 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Xcl1P47993 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Xcl1P47993 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Xcl1P47993 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Xcl1P47993 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Xcl1P47993 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.22□□□□□ -0.13
Xcl1P47993 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Xcl1P47993 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Xcl1P47993 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Xcl1P47993 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Xcl1P47993 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Xcl1P47993 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Xcl1P47993 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Xcl1P47993 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Xcl1P47993 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Xcl1P47993 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.22□□□□□ -0.13
Xcl1P47993 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Xcl1P47993 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Xcl1P47993 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Xcl1P47993 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Xcl1P47993 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC14.21□□□□□ -0.13
Xcl1P47993 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Xcl1P47993 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Xcl1P47993 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Xcl1P47993 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Xcl1P47993 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Xcl1P47993 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Xcl1P47993 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Xcl1P47993 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Xcl1P47993 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.21□□□□□ -0.14
Xcl1P47993 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Xcl1P47993 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Xcl1P47993 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Xcl1P47993 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Xcl1P47993 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Xcl1P47993 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Xcl1P47993 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Xcl1P47993 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Xcl1P47993 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms