Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdx2P43241 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdx2P43241 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdx2P43241 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdx2P43241 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdx2P43241 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdx2P43241 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdx2P43241 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdx2P43241 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cdx2P43241 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdx2P43241 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.98■□□□□ 0.95
Cdx2P43241 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdx2P43241 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Cdx2P43241 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.97■□□□□ 0.95
Cdx2P43241 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdx2P43241 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cdx2P43241 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdx2P43241 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdx2P43241 Gm22238-201ENSMUST00000175222 88 ntBASIC20.96■□□□□ 0.95
Cdx2P43241 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdx2P43241 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdx2P43241 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cdx2P43241 Gm40881-201ENSMUST00000223397 166 ntBASIC20.96■□□□□ 0.95
Cdx2P43241 Gm9847-201ENSMUST00000052528 599 ntBASIC20.96■□□□□ 0.95
Cdx2P43241 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdx2P43241 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdx2P43241 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdx2P43241 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Cdx2P43241 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdx2P43241 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdx2P43241 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdx2P43241 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdx2P43241 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdx2P43241 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdx2P43241 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.93■□□□□ 0.94
Cdx2P43241 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdx2P43241 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.92■□□□□ 0.94
Cdx2P43241 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.92■□□□□ 0.94
Cdx2P43241 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdx2P43241 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdx2P43241 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.91■□□□□ 0.94
Cdx2P43241 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdx2P43241 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.91■□□□□ 0.94
Cdx2P43241 Gm21956-201ENSMUST00000179946 522 ntBASIC20.91■□□□□ 0.94
Cdx2P43241 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cdx2P43241 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdx2P43241 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdx2P43241 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdx2P43241 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdx2P43241 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdx2P43241 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.9■□□□□ 0.94
Cdx2P43241 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdx2P43241 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdx2P43241 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdx2P43241 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.89■□□□□ 0.94
Cdx2P43241 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.89■□□□□ 0.94
Cdx2P43241 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdx2P43241 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.89■□□□□ 0.93
Cdx2P43241 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdx2P43241 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.89■□□□□ 0.93
Cdx2P43241 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdx2P43241 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdx2P43241 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdx2P43241 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdx2P43241 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdx2P43241 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdx2P43241 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdx2P43241 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdx2P43241 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Cdx2P43241 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdx2P43241 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cdx2P43241 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cdx2P43241 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.86■□□□□ 0.93
Cdx2P43241 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.86■□□□□ 0.93
Cdx2P43241 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdx2P43241 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Cdx2P43241 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdx2P43241 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdx2P43241 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.85■□□□□ 0.93
Cdx2P43241 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdx2P43241 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdx2P43241 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.85■□□□□ 0.93
Cdx2P43241 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdx2P43241 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdx2P43241 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdx2P43241 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdx2P43241 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.84■□□□□ 0.93
Cdx2P43241 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.84■□□□□ 0.93
Cdx2P43241 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.83■□□□□ 0.93
Cdx2P43241 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.83■□□□□ 0.93
Cdx2P43241 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.83■□□□□ 0.93
Cdx2P43241 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdx2P43241 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdx2P43241 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdx2P43241 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdx2P43241 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.82■□□□□ 0.92
Cdx2P43241 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdx2P43241 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdx2P43241 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdx2P43241 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms