Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.95■□□□□ 0.46
Abca1P41233 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Abca1P41233 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca1P41233 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca1P41233 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
Abca1P41233 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca1P41233 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca1P41233 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca1P41233 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca1P41233 Gm13241-201ENSMUST00000094493 780 ntBASIC17.93■□□□□ 0.46
Abca1P41233 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Abca1P41233 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca1P41233 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca1P41233 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca1P41233 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca1P41233 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Abca1P41233 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca1P41233 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca1P41233 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abca1P41233 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Abca1P41233 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abca1P41233 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abca1P41233 Gm21956-201ENSMUST00000179946 522 ntBASIC17.91■□□□□ 0.46
Abca1P41233 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.91■□□□□ 0.46
Abca1P41233 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.91■□□□□ 0.46
Abca1P41233 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abca1P41233 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abca1P41233 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abca1P41233 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abca1P41233 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Abca1P41233 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.9■□□□□ 0.46
Abca1P41233 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abca1P41233 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Abca1P41233 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca1P41233 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca1P41233 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.89■□□□□ 0.45
Abca1P41233 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.89■□□□□ 0.45
Abca1P41233 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Abca1P41233 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Abca1P41233 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Abca1P41233 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca1P41233 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca1P41233 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca1P41233 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca1P41233 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca1P41233 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca1P41233 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca1P41233 Gm7417-201ENSMUST00000192950 473 ntBASIC17.88■□□□□ 0.45
Abca1P41233 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca1P41233 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca1P41233 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca1P41233 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.87■□□□□ 0.45
Abca1P41233 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Abca1P41233 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abca1P41233 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.87■□□□□ 0.45
Abca1P41233 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abca1P41233 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.87■□□□□ 0.45
Abca1P41233 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca1P41233 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca1P41233 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca1P41233 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.86■□□□□ 0.45
Abca1P41233 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca1P41233 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Abca1P41233 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.86■□□□□ 0.45
Abca1P41233 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abca1P41233 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.86■□□□□ 0.45
Abca1P41233 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca1P41233 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abca1P41233 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abca1P41233 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.85■□□□□ 0.45
Abca1P41233 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Abca1P41233 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Abca1P41233 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Abca1P41233 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Abca1P41233 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Abca1P41233 Gm9847-201ENSMUST00000052528 599 ntBASIC17.84■□□□□ 0.45
Abca1P41233 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca1P41233 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca1P41233 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca1P41233 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.84■□□□□ 0.45
Abca1P41233 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca1P41233 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Abca1P41233 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Abca1P41233 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Abca1P41233 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Abca1P41233 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Abca1P41233 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.83■□□□□ 0.44
Abca1P41233 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca1P41233 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca1P41233 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.82■□□□□ 0.44
Abca1P41233 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca1P41233 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Abca1P41233 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Abca1P41233 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca1P41233 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca1P41233 Serp2-204ENSMUST00000228055 705 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms