Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Tnfrsf1aP25118 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfrsf1aP25118 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfrsf1aP25118 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Tnfrsf1aP25118 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf1aP25118 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf1aP25118 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Tnfrsf1aP25118 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf1aP25118 Gm16437-201ENSMUST00000025669 507 ntBASIC18.14■□□□□ 0.49
Tnfrsf1aP25118 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf1aP25118 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf1aP25118 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Gm11687-201ENSMUST00000118911 886 ntBASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf1aP25118 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf1aP25118 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf1aP25118 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf1aP25118 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf1aP25118 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.12■□□□□ 0.49
Tnfrsf1aP25118 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf1aP25118 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf1aP25118 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tnfrsf1aP25118 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tnfrsf1aP25118 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf1aP25118 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf1aP25118 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf1aP25118 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf1aP25118 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf1aP25118 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf1aP25118 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.1■□□□□ 0.49
Tnfrsf1aP25118 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf1aP25118 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf1aP25118 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf1aP25118 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf1aP25118 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf1aP25118 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.09■□□□□ 0.49
Tnfrsf1aP25118 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tnfrsf1aP25118 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf1aP25118 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf1aP25118 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf1aP25118 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Tnfrsf1aP25118 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf1aP25118 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf1aP25118 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Gm22567-201ENSMUST00000175542 342 ntBASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.07■□□□□ 0.48
Tnfrsf1aP25118 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf1aP25118 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf1aP25118 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tnfrsf1aP25118 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf1aP25118 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms