Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccl3P10855 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl3P10855 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.51■□□□□ 0.71
Ccl3P10855 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl3P10855 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ccl3P10855 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl3P10855 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl3P10855 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccl3P10855 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl3P10855 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Ccl3P10855 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl3P10855 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccl3P10855 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.49■□□□□ 0.71
Ccl3P10855 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.49■□□□□ 0.71
Ccl3P10855 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl3P10855 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl3P10855 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl3P10855 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl3P10855 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl3P10855 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ccl3P10855 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl3P10855 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl3P10855 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccl3P10855 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl3P10855 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Gm40881-201ENSMUST00000223397 166 ntBASIC19.47■□□□□ 0.71
Ccl3P10855 Gm13241-201ENSMUST00000094493 780 ntBASIC19.47■□□□□ 0.71
Ccl3P10855 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl3P10855 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl3P10855 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccl3P10855 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl3P10855 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccl3P10855 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl3P10855 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl3P10855 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl3P10855 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccl3P10855 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl3P10855 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl3P10855 Gm22238-201ENSMUST00000175222 88 ntBASIC19.45■□□□□ 0.7
Ccl3P10855 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccl3P10855 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl3P10855 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl3P10855 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl3P10855 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl3P10855 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl3P10855 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl3P10855 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccl3P10855 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccl3P10855 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl3P10855 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl3P10855 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccl3P10855 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl3P10855 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl3P10855 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl3P10855 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccl3P10855 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl3P10855 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccl3P10855 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.43■□□□□ 0.7
Ccl3P10855 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.43■□□□□ 0.7
Ccl3P10855 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl3P10855 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl3P10855 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.42■□□□□ 0.7
Ccl3P10855 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccl3P10855 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.42■□□□□ 0.7
Ccl3P10855 Gm9847-201ENSMUST00000052528 599 ntBASIC19.42■□□□□ 0.7
Ccl3P10855 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Ccl3P10855 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl3P10855 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl3P10855 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccl3P10855 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl3P10855 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccl3P10855 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl3P10855 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl3P10855 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccl3P10855 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl3P10855 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl3P10855 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl3P10855 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccl3P10855 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccl3P10855 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccl3P10855 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl3P10855 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl3P10855 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl3P10855 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl3P10855 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl3P10855 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl3P10855 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl3P10855 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccl3P10855 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccl3P10855 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl3P10855 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl3P10855 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl3P10855 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl3P10855 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms