Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.37■■□□□ 1.01
Tspan6O70401 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tspan6O70401 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.37■■□□□ 1.01
Tspan6O70401 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tspan6O70401 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tspan6O70401 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tspan6O70401 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tspan6O70401 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tspan6O70401 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tspan6O70401 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tspan6O70401 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.35■■□□□ 1.01
Tspan6O70401 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tspan6O70401 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.34■■□□□ 1.01
Tspan6O70401 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tspan6O70401 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.34■■□□□ 1.01
Tspan6O70401 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tspan6O70401 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.34■■□□□ 1.01
Tspan6O70401 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tspan6O70401 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tspan6O70401 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.33■■□□□ 1.01
Tspan6O70401 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.33■■□□□ 1.01
Tspan6O70401 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tspan6O70401 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.33■■□□□ 1
Tspan6O70401 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.32■■□□□ 1
Tspan6O70401 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.32■■□□□ 1
Tspan6O70401 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.32■■□□□ 1
Tspan6O70401 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tspan6O70401 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tspan6O70401 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tspan6O70401 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tspan6O70401 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tspan6O70401 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Tspan6O70401 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.31■■□□□ 1
Tspan6O70401 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tspan6O70401 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.31■■□□□ 1
Tspan6O70401 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tspan6O70401 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tspan6O70401 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tspan6O70401 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tspan6O70401 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tspan6O70401 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tspan6O70401 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tspan6O70401 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tspan6O70401 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.3■■□□□ 1
Tspan6O70401 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Tspan6O70401 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Tspan6O70401 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.29■■□□□ 1
Tspan6O70401 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tspan6O70401 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tspan6O70401 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tspan6O70401 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Tspan6O70401 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tspan6O70401 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.28■■□□□ 1
Tspan6O70401 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.28■■□□□ 1
Tspan6O70401 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.28■■□□□ 1
Tspan6O70401 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.28■■□□□ 1
Tspan6O70401 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan6O70401 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tspan6O70401 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan6O70401 Gm15039-201ENSMUST00000118914 875 ntBASIC21.27■■□□□ 1
Tspan6O70401 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan6O70401 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan6O70401 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan6O70401 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tspan6O70401 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan6O70401 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.26■□□□□ 0.99
Tspan6O70401 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.26■□□□□ 0.99
Tspan6O70401 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan6O70401 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan6O70401 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan6O70401 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan6O70401 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan6O70401 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan6O70401 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.25■□□□□ 0.99
Tspan6O70401 Gm7417-201ENSMUST00000192950 473 ntBASIC21.25■□□□□ 0.99
Tspan6O70401 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.25■□□□□ 0.99
Tspan6O70401 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan6O70401 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan6O70401 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan6O70401 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan6O70401 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan6O70401 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.24■□□□□ 0.99
Tspan6O70401 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan6O70401 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.24■□□□□ 0.99
Tspan6O70401 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.24■□□□□ 0.99
Tspan6O70401 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan6O70401 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan6O70401 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan6O70401 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan6O70401 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.23■□□□□ 0.99
Tspan6O70401 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan6O70401 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Tspan6O70401 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.22■□□□□ 0.99
Tspan6O70401 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan6O70401 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Tspan6O70401 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan6O70401 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan6O70401 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.21■□□□□ 0.99
Tspan6O70401 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan6O70401 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms