Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.94■□□□□ 0.46
SncaO55042 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SncaO55042 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SncaO55042 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SncaO55042 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SncaO55042 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.93■□□□□ 0.46
SncaO55042 Gm11599-201ENSMUST00000118720 878 ntBASIC17.93■□□□□ 0.46
SncaO55042 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SncaO55042 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SncaO55042 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SncaO55042 Terc-201ENSMUST00000082862 423 ntBASIC17.92■□□□□ 0.46
SncaO55042 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SncaO55042 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.92■□□□□ 0.46
SncaO55042 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.92■□□□□ 0.46
SncaO55042 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SncaO55042 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SncaO55042 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SncaO55042 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SncaO55042 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SncaO55042 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SncaO55042 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SncaO55042 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SncaO55042 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SncaO55042 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SncaO55042 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SncaO55042 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SncaO55042 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SncaO55042 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.9■□□□□ 0.46
SncaO55042 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SncaO55042 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SncaO55042 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SncaO55042 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.89■□□□□ 0.45
SncaO55042 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SncaO55042 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SncaO55042 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.89■□□□□ 0.45
SncaO55042 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SncaO55042 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SncaO55042 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SncaO55042 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.89■□□□□ 0.45
SncaO55042 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.89■□□□□ 0.45
SncaO55042 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SncaO55042 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SncaO55042 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SncaO55042 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SncaO55042 Gm45364-201ENSMUST00000210883 159 ntBASIC17.88■□□□□ 0.45
SncaO55042 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SncaO55042 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SncaO55042 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SncaO55042 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SncaO55042 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SncaO55042 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
SncaO55042 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SncaO55042 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SncaO55042 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.86■□□□□ 0.45
SncaO55042 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SncaO55042 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SncaO55042 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SncaO55042 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SncaO55042 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SncaO55042 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SncaO55042 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SncaO55042 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SncaO55042 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SncaO55042 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SncaO55042 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SncaO55042 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SncaO55042 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SncaO55042 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SncaO55042 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SncaO55042 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SncaO55042 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SncaO55042 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SncaO55042 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SncaO55042 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SncaO55042 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.82■□□□□ 0.44
SncaO55042 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SncaO55042 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SncaO55042 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.82■□□□□ 0.44
SncaO55042 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SncaO55042 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SncaO55042 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SncaO55042 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SncaO55042 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.81■□□□□ 0.44
SncaO55042 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SncaO55042 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SncaO55042 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.81■□□□□ 0.44
SncaO55042 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.81■□□□□ 0.44
SncaO55042 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SncaO55042 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SncaO55042 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SncaO55042 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SncaO55042 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SncaO55042 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms