Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Dkk1O54908 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Dkk1O54908 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Dkk1O54908 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Dkk1O54908 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Dkk1O54908 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.77■□□□□ 0.6
Dkk1O54908 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.77■□□□□ 0.6
Dkk1O54908 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Dkk1O54908 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.77■□□□□ 0.59
Dkk1O54908 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Dkk1O54908 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Dkk1O54908 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Dkk1O54908 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dkk1O54908 Gm11434-201ENSMUST00000122379 629 ntBASIC18.76■□□□□ 0.59
Dkk1O54908 Gm43930-201ENSMUST00000203868 845 ntBASIC18.76■□□□□ 0.59
Dkk1O54908 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Dkk1O54908 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Dkk1O54908 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dkk1O54908 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.75■□□□□ 0.59
Dkk1O54908 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dkk1O54908 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Dkk1O54908 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dkk1O54908 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Dkk1O54908 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dkk1O54908 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dkk1O54908 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.74■□□□□ 0.59
Dkk1O54908 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dkk1O54908 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.73■□□□□ 0.59
Dkk1O54908 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.73■□□□□ 0.59
Dkk1O54908 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.73■□□□□ 0.59
Dkk1O54908 CT009738.1-201ENSMUST00000219031 809 ntBASIC18.73■□□□□ 0.59
Dkk1O54908 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dkk1O54908 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.72■□□□□ 0.59
Dkk1O54908 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.72■□□□□ 0.59
Dkk1O54908 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.72■□□□□ 0.59
Dkk1O54908 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dkk1O54908 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dkk1O54908 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Dkk1O54908 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.71■□□□□ 0.59
Dkk1O54908 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dkk1O54908 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dkk1O54908 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Dkk1O54908 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Dkk1O54908 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dkk1O54908 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dkk1O54908 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.7■□□□□ 0.58
Dkk1O54908 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dkk1O54908 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.69■□□□□ 0.58
Dkk1O54908 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.69■□□□□ 0.58
Dkk1O54908 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dkk1O54908 Gm32390-201ENSMUST00000212713 1172 ntBASIC18.69■□□□□ 0.58
Dkk1O54908 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dkk1O54908 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dkk1O54908 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Dkk1O54908 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dkk1O54908 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.68■□□□□ 0.58
Dkk1O54908 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dkk1O54908 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dkk1O54908 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dkk1O54908 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dkk1O54908 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dkk1O54908 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dkk1O54908 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dkk1O54908 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dkk1O54908 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dkk1O54908 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dkk1O54908 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Dkk1O54908 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.66■□□□□ 0.58
Dkk1O54908 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dkk1O54908 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dkk1O54908 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dkk1O54908 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dkk1O54908 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dkk1O54908 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dkk1O54908 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dkk1O54908 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dkk1O54908 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Dkk1O54908 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Dkk1O54908 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Dkk1O54908 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dkk1O54908 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Dkk1O54908 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Dkk1O54908 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dkk1O54908 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Dkk1O54908 AC154634.3-201ENSMUST00000224589 736 ntBASIC18.64■□□□□ 0.57
Dkk1O54908 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dkk1O54908 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dkk1O54908 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dkk1O54908 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dkk1O54908 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dkk1O54908 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms