Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Atf6F6VAN0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atf6F6VAN0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Atf6F6VAN0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.32■■□□□ 1.16
Atf6F6VAN0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atf6F6VAN0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atf6F6VAN0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atf6F6VAN0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Atf6F6VAN0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atf6F6VAN0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atf6F6VAN0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atf6F6VAN0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atf6F6VAN0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.31■■□□□ 1.16
Atf6F6VAN0 Gm22567-201ENSMUST00000175542 342 ntBASIC22.31■■□□□ 1.16
Atf6F6VAN0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atf6F6VAN0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Atf6F6VAN0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atf6F6VAN0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atf6F6VAN0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atf6F6VAN0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atf6F6VAN0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Atf6F6VAN0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Atf6F6VAN0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atf6F6VAN0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.29■■□□□ 1.16
Atf6F6VAN0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Atf6F6VAN0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atf6F6VAN0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Atf6F6VAN0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atf6F6VAN0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Atf6F6VAN0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Atf6F6VAN0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atf6F6VAN0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atf6F6VAN0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atf6F6VAN0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atf6F6VAN0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atf6F6VAN0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atf6F6VAN0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atf6F6VAN0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atf6F6VAN0 Mir6538-201ENSMUST00000183713 110 ntBASIC22.26■■□□□ 1.15
Atf6F6VAN0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Atf6F6VAN0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Atf6F6VAN0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.25■■□□□ 1.15
Atf6F6VAN0 Gm14523-201ENSMUST00000117260 558 ntBASIC22.25■■□□□ 1.15
Atf6F6VAN0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.25■■□□□ 1.15
Atf6F6VAN0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atf6F6VAN0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Atf6F6VAN0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.24■■□□□ 1.15
Atf6F6VAN0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Atf6F6VAN0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atf6F6VAN0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atf6F6VAN0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atf6F6VAN0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atf6F6VAN0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.22■■□□□ 1.15
Atf6F6VAN0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atf6F6VAN0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.22■■□□□ 1.15
Atf6F6VAN0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Atf6F6VAN0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Gm7332-201ENSMUST00000118351 454 ntBASIC22.21■■□□□ 1.15
Atf6F6VAN0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atf6F6VAN0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Atf6F6VAN0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Atf6F6VAN0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Atf6F6VAN0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Atf6F6VAN0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atf6F6VAN0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atf6F6VAN0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.2■■□□□ 1.14
Atf6F6VAN0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atf6F6VAN0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Atf6F6VAN0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.19■■□□□ 1.14
Atf6F6VAN0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.19■■□□□ 1.14
Atf6F6VAN0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf6F6VAN0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf6F6VAN0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf6F6VAN0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf6F6VAN0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atf6F6VAN0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atf6F6VAN0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms