Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh17E9PXF0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdh17E9PXF0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh17E9PXF0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh17E9PXF0 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.18■□□□□ 0.82
Pcdh17E9PXF0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh17E9PXF0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh17E9PXF0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh17E9PXF0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh17E9PXF0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Pcdh17E9PXF0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh17E9PXF0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdh17E9PXF0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh17E9PXF0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh17E9PXF0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh17E9PXF0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh17E9PXF0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdh17E9PXF0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Pcdh17E9PXF0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh17E9PXF0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdh17E9PXF0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.14■□□□□ 0.81
Pcdh17E9PXF0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh17E9PXF0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh17E9PXF0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh17E9PXF0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh17E9PXF0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdh17E9PXF0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh17E9PXF0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh17E9PXF0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdh17E9PXF0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh17E9PXF0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh17E9PXF0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh17E9PXF0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdh17E9PXF0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Pcdh17E9PXF0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh17E9PXF0 Gm9959-201ENSMUST00000068277 390 ntBASIC20.09■□□□□ 0.81
Pcdh17E9PXF0 Gm10232-201ENSMUST00000089221 720 ntBASIC20.09■□□□□ 0.81
Pcdh17E9PXF0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdh17E9PXF0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh17E9PXF0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Pcdh17E9PXF0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh17E9PXF0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh17E9PXF0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdh17E9PXF0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh17E9PXF0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh17E9PXF0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh17E9PXF0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh17E9PXF0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh17E9PXF0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh17E9PXF0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh17E9PXF0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh17E9PXF0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.06■□□□□ 0.8
Pcdh17E9PXF0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh17E9PXF0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh17E9PXF0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh17E9PXF0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh17E9PXF0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh17E9PXF0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms