Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip3B9EHT4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip3B9EHT4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip3B9EHT4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip3B9EHT4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Clip3B9EHT4 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.83■□□□□ 0.93
Clip3B9EHT4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Clip3B9EHT4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
Clip3B9EHT4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Clip3B9EHT4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip3B9EHT4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip3B9EHT4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Clip3B9EHT4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip3B9EHT4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip3B9EHT4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.81■□□□□ 0.92
Clip3B9EHT4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Clip3B9EHT4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip3B9EHT4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Clip3B9EHT4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Clip3B9EHT4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip3B9EHT4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Clip3B9EHT4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip3B9EHT4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip3B9EHT4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip3B9EHT4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip3B9EHT4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clip3B9EHT4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip3B9EHT4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.79■□□□□ 0.92
Clip3B9EHT4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip3B9EHT4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip3B9EHT4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip3B9EHT4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.79■□□□□ 0.92
Clip3B9EHT4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Clip3B9EHT4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.78■□□□□ 0.92
Clip3B9EHT4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Clip3B9EHT4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip3B9EHT4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
Clip3B9EHT4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Clip3B9EHT4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip3B9EHT4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip3B9EHT4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip3B9EHT4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.75■□□□□ 0.91
Clip3B9EHT4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip3B9EHT4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip3B9EHT4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip3B9EHT4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip3B9EHT4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.74■□□□□ 0.91
Clip3B9EHT4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip3B9EHT4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip3B9EHT4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip3B9EHT4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Clip3B9EHT4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.72■□□□□ 0.91
Clip3B9EHT4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clip3B9EHT4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.72■□□□□ 0.91
Clip3B9EHT4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip3B9EHT4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Clip3B9EHT4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.72■□□□□ 0.91
Clip3B9EHT4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clip3B9EHT4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.72■□□□□ 0.91
Clip3B9EHT4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip3B9EHT4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip3B9EHT4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Clip3B9EHT4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clip3B9EHT4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Clip3B9EHT4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.7■□□□□ 0.91
Clip3B9EHT4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip3B9EHT4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.7■□□□□ 0.9
Clip3B9EHT4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip3B9EHT4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip3B9EHT4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip3B9EHT4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip3B9EHT4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip3B9EHT4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clip3B9EHT4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.69■□□□□ 0.9
Clip3B9EHT4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip3B9EHT4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clip3B9EHT4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip3B9EHT4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip3B9EHT4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms