Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Gm13241-201ENSMUST00000094493 780 ntBASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5089A1L3C8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5089A1L3C8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5089A1L3C8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.55■□□□□ 0.4
Gm5089A1L3C8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Gm5089A1L3C8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5089A1L3C8 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5089A1L3C8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm5089A1L3C8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Gm5089A1L3C8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5089A1L3C8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.52■□□□□ 0.39
Gm5089A1L3C8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm5089A1L3C8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm5089A1L3C8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm5089A1L3C8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5089A1L3C8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5089A1L3C8 Gm9847-201ENSMUST00000052528 599 ntBASIC17.5■□□□□ 0.39
Gm5089A1L3C8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm5089A1L3C8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5089A1L3C8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5089A1L3C8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm5089A1L3C8 Gm22238-201ENSMUST00000175222 88 ntBASIC17.49■□□□□ 0.39
Gm5089A1L3C8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.49■□□□□ 0.39
Gm5089A1L3C8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm5089A1L3C8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm5089A1L3C8 Gm40881-201ENSMUST00000223397 166 ntBASIC17.49■□□□□ 0.39
Gm5089A1L3C8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5089A1L3C8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5089A1L3C8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm5089A1L3C8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.48■□□□□ 0.39
Gm5089A1L3C8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5089A1L3C8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5089A1L3C8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5089A1L3C8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5089A1L3C8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5089A1L3C8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gm5089A1L3C8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.47■□□□□ 0.39
Gm5089A1L3C8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5089A1L3C8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5089A1L3C8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5089A1L3C8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5089A1L3C8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gm5089A1L3C8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5089A1L3C8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5089A1L3C8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5089A1L3C8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5089A1L3C8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5089A1L3C8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Gm5089A1L3C8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Gm5089A1L3C8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gm5089A1L3C8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.45■□□□□ 0.38
Gm5089A1L3C8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5089A1L3C8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5089A1L3C8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5089A1L3C8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm5089A1L3C8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms