Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4-3A0A0B4J1K1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4-3A0A0B4J1K1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4-3A0A0B4J1K1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4-3A0A0B4J1K1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4-3A0A0B4J1K1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Gm24804-201ENSMUST00000174982 85 ntBASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav4-3A0A0B4J1K1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-3A0A0B4J1K1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.83□□□□□ -0.03
Trav4-3A0A0B4J1K1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav4-3A0A0B4J1K1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.83□□□□□ -0.04
Trav4-3A0A0B4J1K1 Gm8109-201ENSMUST00000194076 746 ntBASIC14.83□□□□□ -0.04
Trav4-3A0A0B4J1K1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-3A0A0B4J1K1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-3A0A0B4J1K1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-3A0A0B4J1K1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.82□□□□□ -0.04
Trav4-3A0A0B4J1K1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-3A0A0B4J1K1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Trav4-3A0A0B4J1K1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav4-3A0A0B4J1K1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-3A0A0B4J1K1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trav4-3A0A0B4J1K1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-3A0A0B4J1K1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav4-3A0A0B4J1K1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-3A0A0B4J1K1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-3A0A0B4J1K1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav4-3A0A0B4J1K1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-3A0A0B4J1K1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-3A0A0B4J1K1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav4-3A0A0B4J1K1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Trav4-3A0A0B4J1K1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-3A0A0B4J1K1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-3A0A0B4J1K1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-3A0A0B4J1K1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-3A0A0B4J1K1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-3A0A0B4J1K1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms